Analysis of interatomic Contacts of Structural Units in PDB entry:
8WI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WI4 entry

There is 1 chain in PDB entry 8WI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 95LYS 1432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8WI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 104Right-handed alpha
Helix 2
AA2
A
106 112Right-handed alpha
Helix 3
AA3
A
113 116Right-handed 310
Helix 4
AA4
A
118 126Right-handed alpha
Helix 5
AA5
A
141 160Right-handed alpha
Helix 6
AA6
A
166 210Right-handed alpha
Helix 7
AA7
A
214 264Right-handed alpha
Helix 8
AA8
A
267 271Right-handed 310
Helix 9
AA9
A
272 282Right-handed alpha
Helix 10
AB1
A
282 294Right-handed alpha
Helix 11
AB2
A
295 298Right-handed 310
Helix 12
AB3
A
299 310Right-handed alpha
Helix 13
AB4
A
318 344Right-handed alpha
Helix 14
AB5
A
347 364Right-handed alpha
Helix 15
AB6
A
364 370Right-handed alpha
Helix 16
AB7
A
374 400Right-handed alpha
Helix 17
AB8
A
401 403Right-handed 310
Helix 18
AB9
A
405 422Right-handed alpha
Helix 19
AC1
A
429 444Right-handed alpha
Helix 20
AC2
A
449 472Right-handed alpha
Helix 21
AC3
A
600 610Right-handed alpha
Helix 22
AC4
A
640 645Right-handed alpha
Helix 23
AC5
A
650 662Right-handed alpha
Helix 24
AC6
A
663 670Right-handed alpha
Helix 25
AC7
A
672 676Right-handed 310
Helix 26
AC8
A
686 702Right-handed alpha
Helix 27
AC9
A
717 728Right-handed alpha
Helix 28
AD1
A
730 734Right-handed 310
Helix 29
AD2
A
766 773Right-handed alpha
Helix 30
AD3
A
775 787Right-handed alpha
Helix 31
AD4
A
842 854Right-handed alpha
Helix 32
AD5
A
855 887Right-handed alpha
Helix 33
AD6
A
904 908Right-handed 310
Helix 34
AD7
A
910 958Right-handed alpha
Helix 35
AD8
A
959 966Right-handed alpha
Helix 36
AD9
A
967 977Right-handed alpha
Helix 37
AE1
A
977 985Right-handed alpha
Helix 38
AE2
A
985 1011Right-handed alpha
Helix 39
AE3
A
1013 1032Right-handed alpha
Helix 40
AE4
A
1033 1052Right-handed alpha
Helix 41
AE5
A
1054 1060Right-handed alpha
Helix 42
AE6
A
1061 1068Right-handed alpha
Helix 43
AE7
A
1069 1120Right-handed alpha
Helix 44
AE8
A
1125 1139Right-handed alpha
Helix 45
AE9
A
1142 1164Right-handed alpha
Helix 46
AF1
A
1237 1242Right-handed alpha
Helix 47
AF2
A
1262 1267Right-handed alpha
Helix 48
AF3
A
1283 1289Right-handed alpha
Helix 49
AF4
A
1295 1306Right-handed alpha
Helix 50
AF5
A
1308 1314Right-handed alpha
Helix 51
AF6
A
1324 1328Right-handed 310
Helix 52
AF7
A
1331 1342Right-handed alpha
Helix 53
AF8
A
1363 1376Right-handed alpha
Helix 54
AF9
A
1410 1417Right-handed alpha
Helix 55
AG1
A
1420 1432Right-handed alpha
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There are 5 sheets in PDB entry 8WI4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 586first strand
Strand 2
A
488 492anti-parallel
Strand 3
A
619 621anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 628first strand
Strand 2
A
705 708parallel
Strand 3
A
736 738parallel
Strand 4
A
590 594parallel
Strand 5
A
753 757parallel
Strand 6
A
760 763anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1210 1216first strand
Strand 2
A
1193 1200anti-parallel
Strand 3
A
1248 1253anti-parallel
Strand 4
A
1256 1257anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1224 1225first strand
Strand 2
A
1383 1384parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1398 1401first strand
Strand 2
A
1404 1408anti-parallel
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