Analysis of interatomic Contacts of Structural Units in PDB entry:
8WI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WI5 entry

There are 2 chains in PDB entry 8WI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 94GLY 1437
B
 CYS 46LEU 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 8WI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 112Right-handed alpha
Helix 2
AA2
A
112 123Right-handed alpha
Helix 3
AA3
A
141 158Right-handed alpha
Helix 4
AA4
A
166 175Right-handed alpha
Helix 5
AA5
A
175 210Right-handed alpha
Helix 6
AA6
A
216 263Right-handed alpha
Helix 7
AA7
A
272 282Right-handed alpha
Helix 8
AA8
A
282 296Right-handed alpha
Helix 9
AA9
A
300 316Right-handed alpha
Helix 10
AB1
A
319 364Right-handed alpha
Helix 11
AB2
A
364 372Right-handed alpha
Helix 12
AB3
A
373 400Right-handed alpha
Helix 13
AB4
A
401 403Right-handed 310
Helix 14
AB5
A
405 424Right-handed alpha
Helix 15
AB6
A
429 472Right-handed alpha
Helix 16
AB7
A
600 610Right-handed alpha
Helix 17
AB8
A
638 645Right-handed alpha
Helix 18
AB9
A
650 661Right-handed alpha
Helix 19
AC1
A
663 670Right-handed alpha
Helix 20
AC2
A
672 676Right-handed 310
Helix 21
AC3
A
686 702Right-handed alpha
Helix 22
AC4
A
716 728Right-handed alpha
Helix 23
AC5
A
743 748Right-handed 310
Helix 24
AC6
A
766 774Right-handed alpha
Helix 25
AC7
A
775 786Right-handed alpha
Helix 26
AC8
A
842 853Right-handed alpha
Helix 27
AC9
A
855 887Right-handed alpha
Helix 28
AD1
A
904 908Right-handed 310
Helix 29
AD2
A
910 958Right-handed alpha
Helix 30
AD3
A
960 966Right-handed alpha
Helix 31
AD4
A
967 1011Right-handed alpha
Helix 32
AD5
A
1014 1046Right-handed alpha
Helix 33
AD6
A
1046 1060Right-handed alpha
Helix 34
AD7
A
1060 1068Right-handed alpha
Helix 35
AD8
A
1071 1120Right-handed alpha
Helix 36
AD9
A
1125 1139Right-handed alpha
Helix 37
AE1
A
1141 1168Right-handed alpha
Helix 38
AE2
A
1234 1241Right-handed alpha
Helix 39
AE3
A
1259 1261Right-handed 310
Helix 40
AE4
A
1262 1267Right-handed alpha
Helix 41
AE5
A
1295 1306Right-handed alpha
Helix 42
AE6
A
1308 1314Right-handed alpha
Helix 43
AE7
A
1324 1328Right-handed 310
Helix 44
AE8
A
1331 1346Right-handed alpha
Helix 45
AE9
A
1361 1376Right-handed alpha
Helix 46
AF1
A
1410 1415Right-handed alpha
Helix 47
AF2
A
1420 1435Right-handed alpha
Helix 48
AF3
B
48 56Right-handed alpha
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There are 7 sheets in PDB entry 8WI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 586first strand
Strand 2
A
488 499anti-parallel
Strand 3
A
613 621anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 628first strand
Strand 2
A
705 709parallel
Strand 3
A
736 740parallel
Strand 4
A
590 594parallel
Strand 5
A
752 757parallel
Strand 6
A
760 765anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 894first strand
Strand 2
A
899 901anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1210 1213first strand
Strand 2
A
1193 1200anti-parallel
Strand 3
A
1216 1217anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1210 1213first strand
Strand 2
A
1193 1200anti-parallel
Strand 3
A
1248 1253anti-parallel
Strand 4
A
1256 1257anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1270 1273first strand
Strand 2
A
1350 1354parallel
Strand 3
A
1380 1384parallel
Strand 4
A
1222 1227parallel
Strand 5
A
1396 1400parallel
Strand 6
A
1405 1409anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1282 1283first strand
Strand 2
A
1322 1323anti-parallel
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