Analysis of interatomic Contacts of Structural Units in PDB entry:
8WJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WJO entry

There are 4 chains in PDB entry 8WJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 219ASP 921
B
 ASN 269ASP 947
C
 ASN 4GLN 254
D
 ASP 86THR 161
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8WJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
219 269Right-handed alpha
Helix 2
AA2
A
271 357Right-handed alpha
Helix 3
AA3
A
751 825Right-handed alpha
Helix 4
AA4
A
827 832Right-handed alpha
Helix 5
AA5
A
837 841Right-handed 310
Helix 6
AA6
A
846 850Right-handed 310
Helix 7
AA7
A
851 859Right-handed alpha
Helix 8
AA8
A
860 863Right-handed 310
Helix 9
AA9
A
867 872Right-handed 310
Helix 10
AB1
A
874 881Right-handed alpha
Helix 11
AB2
A
895 921Right-handed alpha
Helix 12
AB3
B
270 361Right-handed alpha
Helix 13
AB4
B
361 391Right-handed alpha
Helix 14
AB5
B
795 799Right-handed 310
Helix 15
AB6
B
802 839Right-handed alpha
Helix 16
AB7
B
839 881Right-handed alpha
Helix 17
AB8
B
886 891Right-handed 310
Helix 18
AB9
B
896 919Right-handed alpha
Helix 19
AC1
B
921 947Right-handed alpha
Helix 20
AC2
C
15 17Right-handed 310
Helix 21
AC3
C
18 25Right-handed alpha
Helix 22
AC4
C
30 43Right-handed alpha
Helix 23
AC5
C
46 50Right-handed 310
Helix 24
AC6
C
59 101Right-handed alpha
Helix 25
AC7
C
107 114Right-handed alpha
Helix 26
AC8
C
121 128Right-handed alpha
Helix 27
AC9
C
141 146Right-handed alpha
Helix 28
AD1
C
149 156Right-handed alpha
Helix 29
AD2
C
231 235Right-handed 310
Helix 30
AD3
C
239 252Right-handed alpha
Helix 31
AD4
D
87 94Right-handed alpha
Helix 32
AD5
D
132 150Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8WJO.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 197first strand
Strand 2
C
202 203anti-parallel
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