Analysis of interatomic Contacts of Structural Units in PDB entry:
8WJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WJW entry

There is 1 chain in PDB entry 8WJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3GLN 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8WJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
38 52Right-handed alpha
Helix 4
AA4
A
61 65Right-handed 310
Helix 5
AA5
A
66 77Right-handed alpha
Helix 6
AA6
A
80 82Right-handed 310
Helix 7
AA7
A
99 112Right-handed alpha
Helix 8
AA8
A
133 147Right-handed alpha
Helix 9
AA9
A
159 170Right-handed alpha
Helix 10
AB1
A
191 199Right-handed alpha
Helix 11
AB2
A
209 214Right-handed alpha
Helix 12
AB3
A
218 221Right-handed 310
Helix 13
AB4
A
222 236Right-handed alpha
Helix 14
AB5
A
238 250Right-handed alpha
Helix 15
AB6
A
260 269Right-handed alpha
Helix 16
AB7
A
270 273Right-handed 310
Helix 17
AB8
A
276 289Right-handed alpha
Helix 18
AB9
A
297 302Right-handed alpha
Helix 19
AC1
A
303 308Right-handed 310
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There are 2 sheets in PDB entry 8WJW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
14 16anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
84 90parallel
Strand 3
A
118 121parallel
Strand 4
A
153 156parallel
Strand 5
A
176 180parallel
Strand 6
A
202 206parallel
Strand 7
A
253 254parallel
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