Analysis of interatomic Contacts of Structural Units in PDB entry:
8WL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WL3 entry

There are 2 chains in PDB entry 8WL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2ILE 309
B
 GLU -1ILE 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8WL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
32 43Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
90 96Right-handed 310
Helix 6
AA6
A
107 114Right-handed alpha
Helix 7
AA7
A
117 119Right-handed 310
Helix 8
AA8
A
158 169Right-handed alpha
Helix 9
AA9
A
178 201Right-handed alpha
Helix 10
AB1
A
203 209Right-handed alpha
Helix 11
AB2
A
212 232Right-handed alpha
Helix 12
AB3
A
236 247Right-handed alpha
Helix 13
AB4
A
258 266Right-handed alpha
Helix 14
AB5
A
271 274Right-handed 310
Helix 15
AB6
A
275 286Right-handed alpha
Helix 16
AB7
A
290 308Right-handed alpha
Helix 17
AB8
B
9 22Right-handed alpha
Helix 18
AB9
B
32 43Right-handed alpha
Helix 19
AC1
B
62 66Right-handed 310
Helix 20
AC2
B
81 89Right-handed alpha
Helix 21
AC3
B
90 96Right-handed 310
Helix 22
AC4
B
107 114Right-handed alpha
Helix 23
AC5
B
117 119Right-handed 310
Helix 24
AC6
B
158 169Right-handed alpha
Helix 25
AC7
B
178 201Right-handed alpha
Helix 26
AC8
B
203 209Right-handed alpha
Helix 27
AC9
B
212 232Right-handed alpha
Helix 28
AD1
B
236 246Right-handed alpha
Helix 29
AD2
B
258 266Right-handed alpha
Helix 30
AD3
B
271 274Right-handed 310
Helix 31
AD4
B
275 286Right-handed alpha
Helix 32
AD5
B
290 308Right-handed alpha
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There are 4 sheets in PDB entry 8WL3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
25 29parallel
Strand 3
A
2 6parallel
Strand 4
A
72 75parallel
Strand 5
A
98 101parallel
Strand 6
A
121 126parallel
Strand 7
A
146 150anti-parallel
Strand 8
A
173 175parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
137 139parallel
Strand 4
A
131 134anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
25 29parallel
Strand 3
B
2 6parallel
Strand 4
B
72 75parallel
Strand 5
B
98 101parallel
Strand 6
B
121 126parallel
Strand 7
B
146 150anti-parallel
Strand 8
B
173 175parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
44 47anti-parallel
Strand 3
B
137 139parallel
Strand 4
B
131 134anti-parallel
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