Analysis of interatomic Contacts of Structural Units in PDB entry:
8WL9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WL9 entry

There is 1 chain in PDB entry 8WL9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24LYS 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8WL9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 54Right-handed alpha
Helix 2
AA2
A
67 81Right-handed alpha
Helix 3
AA3
A
96 106Right-handed alpha
Helix 4
AA4
A
118 125Right-handed alpha
Helix 5
AA5
A
136 153Right-handed alpha
Helix 6
AA6
A
168 185Right-handed alpha
Helix 7
AA7
A
199 214Right-handed alpha
Helix 8
AA8
A
224 238Right-handed alpha
Helix 9
AA9
A
252 262Right-handed alpha
Helix 10
AB1
A
271 289Right-handed alpha
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There are 2 sheets in PDB entry 8WL9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
27 31parallel
Strand 3
A
85 88parallel
Strand 4
A
109 113parallel
Strand 5
A
131 135parallel
Strand 6
A
300 304parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 195first strand
Strand 2
A
157 163parallel
Strand 3
A
217 222parallel
Strand 4
A
245 250parallel
Strand 5
A
266 269parallel
Strand 6
A
307 310anti-parallel
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