Analysis of interatomic Contacts of Structural Units in PDB entry:
8WLU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WLU entry

There are 3 chains in PDB entry 8WLU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 19	LEU 1124
C	LYS 19	LEU 1124
B	LYS 19	LEU 1124

There are 75 helices in PDB entry 8WLU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	282	291	Right-handed alpha
Helix 2	AA2	A	325	331	Right-handed alpha
Helix 3	AA3	A	352	357	Right-handed 310
Helix 4	AA4	A	371	377	Right-handed 310
Helix 5	AA5	A	393	398	Right-handed 310
Helix 6	AA6	A	404	410	Right-handed alpha
Helix 7	AA7	A	426	431	Right-handed alpha
Helix 8	AA8	A	489	492	Right-handed 310
Helix 9	AA9	A	606	611	Right-handed alpha
Helix 10	AB1	A	612	616	Right-handed 310
Helix 11	AB2	A	617	625	Right-handed alpha
Helix 12	AB3	A	720	725	Right-handed alpha
Helix 13	AB4	A	729	740	Right-handed alpha
Helix 14	AB5	A	741	766	Right-handed alpha
Helix 15	AB6	A	799	809	Right-handed alpha
Helix 16	AB7	A	831	839	Right-handed alpha
Helix 17	AB8	A	849	867	Right-handed alpha
Helix 18	AB9	A	869	873	Right-handed 310
Helix 19	AC1	A	880	893	Right-handed alpha
Helix 20	AC2	A	895	902	Right-handed alpha
Helix 21	AC3	A	902	923	Right-handed alpha
Helix 22	AC4	A	928	948	Right-handed alpha
Helix 23	AC5	A	949	951	Right-handed 310
Helix 24	AC6	A	959	967	Right-handed alpha
Helix 25	AC7	A	968	1016	Right-handed alpha
Helix 26	AC8	C	282	291	Right-handed alpha
Helix 27	AC9	C	325	331	Right-handed alpha
Helix 28	AD1	C	352	357	Right-handed 310
Helix 29	AD2	C	371	377	Right-handed 310
Helix 30	AD3	C	393	398	Right-handed 310
Helix 31	AD4	C	404	410	Right-handed alpha
Helix 32	AD5	C	426	431	Right-handed alpha
Helix 33	AD6	C	489	492	Right-handed 310
Helix 34	AD7	C	606	611	Right-handed alpha
Helix 35	AD8	C	612	616	Right-handed 310
Helix 36	AD9	C	617	625	Right-handed alpha
Helix 37	AE1	C	720	725	Right-handed alpha
Helix 38	AE2	C	729	740	Right-handed alpha
Helix 39	AE3	C	741	766	Right-handed alpha
Helix 40	AE4	C	799	809	Right-handed alpha
Helix 41	AE5	C	831	839	Right-handed alpha
Helix 42	AE6	C	849	867	Right-handed alpha
Helix 43	AE7	C	869	873	Right-handed 310
Helix 44	AE8	C	880	893	Right-handed alpha
Helix 45	AE9	C	895	902	Right-handed alpha
Helix 46	AF1	C	902	923	Right-handed alpha
Helix 47	AF2	C	928	948	Right-handed alpha
Helix 48	AF3	C	949	951	Right-handed 310
Helix 49	AF4	C	959	967	Right-handed alpha
Helix 50	AF5	C	968	1015	Right-handed alpha
Helix 51	AF6	B	282	291	Right-handed alpha
Helix 52	AF7	B	325	331	Right-handed alpha
Helix 53	AF8	B	352	357	Right-handed 310
Helix 54	AF9	B	371	377	Right-handed 310
Helix 55	AG1	B	393	398	Right-handed 310
Helix 56	AG2	B	404	410	Right-handed alpha
Helix 57	AG3	B	426	431	Right-handed alpha
Helix 58	AG4	B	489	492	Right-handed 310
Helix 59	AG5	B	606	611	Right-handed alpha
Helix 60	AG6	B	612	616	Right-handed 310
Helix 61	AG7	B	617	625	Right-handed alpha
Helix 62	AG8	B	720	725	Right-handed alpha
Helix 63	AG9	B	729	740	Right-handed alpha
Helix 64	AH1	B	741	766	Right-handed alpha
Helix 65	AH2	B	799	809	Right-handed alpha
Helix 66	AH3	B	831	839	Right-handed alpha
Helix 67	AH4	B	849	867	Right-handed alpha
Helix 68	AH5	B	869	873	Right-handed 310
Helix 69	AH6	B	880	893	Right-handed alpha
Helix 70	AH7	B	895	902	Right-handed alpha
Helix 71	AH8	B	902	923	Right-handed alpha
Helix 72	AH9	B	928	948	Right-handed alpha
Helix 73	AI1	B	949	951	Right-handed 310
Helix 74	AI2	B	959	967	Right-handed alpha
Helix 75	AI3	B	968	1015	Right-handed alpha

There are 48 sheets in PDB entry 8WLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	36	first strand
Strand 2	A	65	71	anti-parallel
Strand 3	A	252	257	anti-parallel
Strand 4	A	88	93	anti-parallel
Strand 5	A	180	191	anti-parallel
Strand 6	A	194	206	anti-parallel
Strand 7	A	216	223	anti-parallel
Strand 8	A	41	42	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	60	first strand
Strand 2	A	259	267	anti-parallel
Strand 3	A	273	278	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	231	238	anti-parallel
Strand 3	A	138	142	parallel
Strand 4	A	147	149	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	231	238	anti-parallel
Strand 3	A	99	105	anti-parallel
Strand 4	A	114	119	anti-parallel
Strand 5	A	124	133	anti-parallel
Strand 6	A	154	165	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	303	first strand
Strand 2	A	582	586	anti-parallel
Strand 3	A	596	600	anti-parallel
Strand 4	A	635	638	anti-parallel
Strand 5	A	629	632	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	316	first strand
Strand 2	A	525	530	parallel
Strand 3	A	533	541	anti-parallel
Strand 4	A	571	575	anti-parallel
Strand 5	A	560	564	anti-parallel
Strand 6	A	552	554	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	346	first strand
Strand 2	A	382	391	anti-parallel
Strand 3	A	494	503	anti-parallel
Strand 4	A	419	425	anti-parallel
Strand 5	A	364	367	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	350	first strand
Strand 2	A	511	512	parallel
Strand 3	A	379	380	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	442	first strand
Strand 2	A	479	481	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	641	642	first strand
Strand 2	A	676	679	parallel
Strand 3	A	657	660	anti-parallel
Strand 4	A	651	654	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	684	686	first strand
Strand 2	B	770	772	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	694	711	first strand
Strand 2	A	1042	1061	anti-parallel
Strand 3	A	1030	1039	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	694	711	first strand
Strand 2	A	1042	1061	anti-parallel
Strand 3	A	1077	1080	anti-parallel
Strand 4	A	1085	1088	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	719	first strand
Strand 2	A	841	844	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	770	772	first strand
Strand 2	C	684	686	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	779	780	first strand
Strand 2	A	783	784	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1103	1108	first strand
Strand 2	A	1069	1073	anti-parallel
Strand 3	A	1064	1066	anti-parallel
Strand 4	A	1116	1117	parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	36	first strand
Strand 2	C	65	71	anti-parallel
Strand 3	C	252	257	anti-parallel
Strand 4	C	88	93	anti-parallel
Strand 5	C	180	191	anti-parallel
Strand 6	C	194	206	anti-parallel
Strand 7	C	216	223	anti-parallel
Strand 8	C	41	42	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	60	first strand
Strand 2	C	259	267	anti-parallel
Strand 3	C	273	278	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	231	238	anti-parallel
Strand 3	C	138	142	parallel
Strand 4	C	147	149	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	231	238	anti-parallel
Strand 3	C	99	105	anti-parallel
Strand 4	C	114	119	anti-parallel
Strand 5	C	124	133	anti-parallel
Strand 6	C	154	165	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	303	first strand
Strand 2	C	582	586	anti-parallel
Strand 3	C	596	600	anti-parallel
Strand 4	C	635	638	anti-parallel
Strand 5	C	629	632	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	316	first strand
Strand 2	C	525	530	parallel
Strand 3	C	533	541	anti-parallel
Strand 4	C	571	575	anti-parallel
Strand 5	C	560	564	anti-parallel
Strand 6	C	552	554	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	346	first strand
Strand 2	C	382	391	anti-parallel
Strand 3	C	494	503	anti-parallel
Strand 4	C	419	425	anti-parallel
Strand 5	C	364	367	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	349	350	first strand
Strand 2	C	511	512	parallel
Strand 3	C	379	380	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	442	first strand
Strand 2	C	479	481	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	641	642	first strand
Strand 2	C	676	679	parallel
Strand 3	C	657	660	anti-parallel
Strand 4	C	651	654	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	694	711	first strand
Strand 2	C	1042	1061	anti-parallel
Strand 3	C	1030	1039	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	694	711	first strand
Strand 2	C	1042	1061	anti-parallel
Strand 3	C	1077	1080	anti-parallel
Strand 4	C	1085	1088	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	719	first strand
Strand 2	C	841	844	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	770	772	first strand
Strand 2	B	684	686	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	779	780	first strand
Strand 2	C	783	784	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1103	1108	first strand
Strand 2	C	1069	1073	anti-parallel
Strand 3	C	1064	1066	anti-parallel
Strand 4	C	1116	1117	parallel

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There are 8 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	36	first strand
Strand 2	B	65	71	anti-parallel
Strand 3	B	252	257	anti-parallel
Strand 4	B	88	93	anti-parallel
Strand 5	B	180	191	anti-parallel
Strand 6	B	194	206	anti-parallel
Strand 7	B	216	223	anti-parallel
Strand 8	B	41	42	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	60	first strand
Strand 2	B	259	267	anti-parallel
Strand 3	B	273	278	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	83	first strand
Strand 2	B	231	238	anti-parallel
Strand 3	B	138	142	parallel
Strand 4	B	147	149	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	83	first strand
Strand 2	B	231	238	anti-parallel
Strand 3	B	99	105	anti-parallel
Strand 4	B	114	119	anti-parallel
Strand 5	B	124	133	anti-parallel
Strand 6	B	154	165	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	303	first strand
Strand 2	B	582	586	anti-parallel
Strand 3	B	596	599	anti-parallel
Strand 4	B	635	638	anti-parallel
Strand 5	B	629	632	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	316	first strand
Strand 2	B	525	530	parallel
Strand 3	B	533	541	anti-parallel
Strand 4	B	571	575	anti-parallel
Strand 5	B	560	564	anti-parallel
Strand 6	B	552	554	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	346	first strand
Strand 2	B	382	391	anti-parallel
Strand 3	B	494	503	anti-parallel
Strand 4	B	419	425	anti-parallel
Strand 5	B	364	367	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	350	first strand
Strand 2	B	511	512	parallel
Strand 3	B	379	380	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	442	first strand
Strand 2	B	479	481	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	641	642	first strand
Strand 2	B	676	679	parallel
Strand 3	B	657	660	anti-parallel
Strand 4	B	651	654	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	695	711	first strand
Strand 2	B	1042	1061	anti-parallel
Strand 3	B	1030	1039	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	695	711	first strand
Strand 2	B	1042	1061	anti-parallel
Strand 3	B	1077	1080	anti-parallel
Strand 4	B	1085	1088	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	716	719	first strand
Strand 2	B	841	844	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	779	780	first strand
Strand 2	B	783	784	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1103	1108	first strand
Strand 2	B	1069	1073	anti-parallel
Strand 3	B	1064	1066	anti-parallel
Strand 4	B	1116	1117	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WLU

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WLU