Analysis of interatomic Contacts of Structural Units in PDB entry:
8WLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WLW entry

There are 4 chains in PDB entry 8WLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ARG 158
C
 ALA 2ARG 158
B
 ALA 2GLY 157
D
 ALA 2GLY 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8WLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 24Right-handed alpha
Helix 2
AA2
A
47 51Right-handed 310
Helix 3
AA3
A
56 69Right-handed alpha
Helix 4
AA4
A
70 77Right-handed alpha
Helix 5
AA5
A
86 97Right-handed alpha
Helix 6
AA6
A
106 117Right-handed alpha
Helix 7
AA7
A
127 132Right-handed alpha
Helix 8
AA8
A
141 143Right-handed 310
Helix 9
AA9
A
144 157Right-handed alpha
Helix 10
AB1
C
4 24Right-handed alpha
Helix 11
AB2
C
47 51Right-handed 310
Helix 12
AB3
C
56 69Right-handed alpha
Helix 13
AB4
C
70 77Right-handed alpha
Helix 14
AB5
C
86 97Right-handed alpha
Helix 15
AB6
C
106 117Right-handed alpha
Helix 16
AB7
C
127 132Right-handed alpha
Helix 17
AB8
C
141 143Right-handed 310
Helix 18
AB9
C
144 157Right-handed alpha
Helix 19
AC1
B
4 24Right-handed alpha
Helix 20
AC2
B
47 51Right-handed 310
Helix 21
AC3
B
56 69Right-handed alpha
Helix 22
AC4
B
70 77Right-handed alpha
Helix 23
AC5
B
86 97Right-handed alpha
Helix 24
AC6
B
106 118Right-handed alpha
Helix 25
AC7
B
127 132Right-handed alpha
Helix 26
AC8
B
141 143Right-handed 310
Helix 27
AC9
B
144 157Right-handed alpha
Helix 28
AD1
D
4 24Right-handed alpha
Helix 29
AD2
D
47 51Right-handed 310
Helix 30
AD3
D
56 69Right-handed alpha
Helix 31
AD4
D
70 77Right-handed alpha
Helix 32
AD5
D
86 97Right-handed alpha
Helix 33
AD6
D
106 117Right-handed alpha
Helix 34
AD7
D
127 132Right-handed alpha
Helix 35
AD8
D
141 143Right-handed 310
Helix 36
AD9
D
144 157Right-handed alpha
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There are 4 sheets in PDB entry 8WLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 45first strand
Strand 2
A
30 34anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
100 105parallel
Strand 5
A
137 138parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 45first strand
Strand 2
C
30 34anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
100 105parallel
Strand 5
C
137 138parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 45first strand
Strand 2
B
30 34anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
100 105parallel
Strand 5
B
137 138parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 45first strand
Strand 2
D
30 34anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
100 105parallel
Strand 5
D
137 138parallel
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