Analysis of interatomic Contacts of Structural Units in PDB entry:
8WMW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WMW entry

There are 24 chains in PDB entry 8WMW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 11	GLY 754
B	THR 2	GLY 733
C	SER 2	TYR 81
D	GLU 3	GLY 141
E	VAL 2	VAL 61
F	ASP 28	ARG 188
I	MET 1	GLU 34
J	MET 1	MET 42
L	SER 2	LEU 152
M	MET 1	GLN 30
O	LEU 22	GLY 125
K	VAL 10	LEU 86
c	ASP 43	PHE 212
a	GLU 42	LYS 216
b	ALA 29	TYR 222
h	PHE 64	TYR 225
e	ASN 35	PHE 203
k	ARG 47	PRO 226
f	ALA 37	PHE 210
i	ASP 39	SER 218
j	MET 38	ASN 209
d	VAL 57	SER 219
g	ALA 37	CYS 256
R	PHE 41	LYS 132

There are187 helices in PDB entry 8WMW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	27	31	Right-handed 310
Helix 2	AA2	A	38	42	Right-handed 310
Helix 3	AA3	A	46	55	Right-handed alpha
Helix 4	AA4	A	58	62	Right-handed 310
Helix 5	AA5	A	65	98	Right-handed alpha
Helix 6	AA6	A	100	107	Right-handed alpha
Helix 7	AA7	A	123	128	Right-handed 310
Helix 8	AA8	A	143	152	Right-handed alpha
Helix 9	AA9	A	155	183	Right-handed alpha
Helix 10	AB1	A	187	194	Right-handed alpha
Helix 11	AB2	A	195	206	Right-handed alpha
Helix 12	AB3	A	207	222	Right-handed alpha
Helix 13	AB4	A	222	233	Right-handed alpha
Helix 14	AB5	A	235	239	Right-handed 310
Helix 15	AB6	A	241	248	Right-handed alpha
Helix 16	AB7	A	248	256	Right-handed alpha
Helix 17	AB8	A	257	262	Right-handed 310
Helix 18	AB9	A	263	268	Right-handed alpha
Helix 19	AC1	A	270	277	Right-handed 310
Helix 20	AC2	A	292	311	Right-handed alpha
Helix 21	AC3	A	323	331	Right-handed alpha
Helix 22	AC4	A	342	348	Right-handed alpha
Helix 23	AC5	A	350	376	Right-handed alpha
Helix 24	AC6	A	385	418	Right-handed alpha
Helix 25	AC7	A	420	424	Right-handed 310
Helix 26	AC8	A	427	434	Right-handed alpha
Helix 27	AC9	A	435	453	Right-handed alpha
Helix 28	AD1	A	454	467	Right-handed alpha
Helix 29	AD2	A	469	473	Right-handed 310
Helix 30	AD3	A	483	496	Right-handed alpha
Helix 31	AD4	A	509	513	Right-handed 310
Helix 32	AD5	A	531	558	Right-handed alpha
Helix 33	AD6	A	567	572	Right-handed alpha
Helix 34	AD7	A	589	620	Right-handed alpha
Helix 35	AD8	A	626	628	Right-handed 310
Helix 36	AD9	A	637	642	Right-handed alpha
Helix 37	AE1	A	644	652	Right-handed alpha
Helix 38	AE2	A	652	657	Right-handed alpha
Helix 39	AE3	A	657	662	Right-handed alpha
Helix 40	AE4	A	668	690	Right-handed alpha
Helix 41	AE5	A	692	710	Right-handed alpha
Helix 42	AE6	A	722	754	Right-handed alpha
Helix 43	AE7	B	8	13	Right-handed alpha
Helix 44	AE8	B	17	26	Right-handed alpha
Helix 45	AE9	B	29	33	Right-handed 310
Helix 46	AF1	B	37	71	Right-handed alpha
Helix 47	AF2	B	72	79	Right-handed alpha
Helix 48	AF3	B	96	103	Right-handed alpha
Helix 49	AF4	B	118	126	Right-handed alpha
Helix 50	AF5	B	130	155	Right-handed alpha
Helix 51	AF6	B	163	168	Right-handed alpha
Helix 52	AF7	B	169	180	Right-handed alpha
Helix 53	AF8	B	182	196	Right-handed alpha
Helix 54	AF9	B	196	202	Right-handed alpha
Helix 55	AG1	B	228	233	Right-handed 310
Helix 56	AG2	B	268	287	Right-handed alpha
Helix 57	AG3	B	299	307	Right-handed alpha
Helix 58	AG4	B	320	328	Right-handed alpha
Helix 59	AG5	B	328	354	Right-handed alpha
Helix 60	AG6	B	363	396	Right-handed alpha
Helix 61	AG7	B	405	413	Right-handed alpha
Helix 62	AG8	B	413	445	Right-handed alpha
Helix 63	AG9	B	447	451	Right-handed 310
Helix 64	AH1	B	456	466	Right-handed alpha
Helix 65	AH2	B	475	479	Right-handed 310
Helix 66	AH3	B	482	488	Right-handed alpha
Helix 67	AH4	B	492	501	Right-handed alpha
Helix 68	AH5	B	512	539	Right-handed alpha
Helix 69	AH6	B	548	552	Right-handed 310
Helix 70	AH7	B	561	565	Right-handed 310
Helix 71	AH8	B	570	603	Right-handed alpha
Helix 72	AH9	B	604	612	Right-handed alpha
Helix 73	AI1	B	614	622	Right-handed alpha
Helix 74	AI2	B	622	632	Right-handed alpha
Helix 75	AI3	B	642	665	Right-handed alpha
Helix 76	AI4	B	666	684	Right-handed alpha
Helix 77	AI5	B	700	732	Right-handed alpha
Helix 78	AI6	C	15	21	Right-handed alpha
Helix 79	AI7	C	44	48	Right-handed 310
Helix 80	AI8	C	52	58	Right-handed alpha
Helix 81	AI9	D	22	28	Right-handed alpha
Helix 82	AJ1	D	64	80	Right-handed alpha
Helix 83	AJ2	D	122	126	Right-handed 310
Helix 84	AJ3	F	28	32	Right-handed 310
Helix 85	AJ4	F	38	57	Right-handed alpha
Helix 86	AJ5	F	63	85	Right-handed alpha
Helix 87	AJ6	F	103	107	Right-handed 310
Helix 88	AJ7	F	110	137	Right-handed alpha
Helix 89	AJ8	F	142	147	Right-handed alpha
Helix 90	AJ9	F	149	160	Right-handed alpha
Helix 91	AK1	F	162	173	Right-handed alpha
Helix 92	AK2	F	179	183	Right-handed 310
Helix 93	AK3	I	4	16	Right-handed alpha
Helix 94	AK4	I	16	31	Right-handed alpha
Helix 95	AK5	J	2	10	Right-handed alpha
Helix 96	AK6	J	11	34	Right-handed alpha
Helix 97	AK7	L	9	11	Right-handed 310
Helix 98	AK8	L	19	24	Right-handed alpha
Helix 99	AK9	L	24	34	Right-handed alpha
Helix 100	AL1	L	42	66	Right-handed alpha
Helix 101	AL2	L	73	101	Right-handed alpha
Helix 102	AL3	L	112	141	Right-handed alpha
Helix 103	AL4	L	141	146	Right-handed alpha
Helix 104	AL5	M	3	30	Right-handed alpha
Helix 105	AL6	O	43	60	Right-handed alpha
Helix 106	AL7	O	72	87	Right-handed alpha
Helix 107	AL8	O	97	124	Right-handed alpha
Helix 108	AL9	K	17	39	Right-handed alpha
Helix 109	AM1	K	58	84	Right-handed alpha
Helix 110	AM2	c	71	76	Right-handed alpha
Helix 111	AM3	c	77	105	Right-handed alpha
Helix 112	AM4	c	114	126	Right-handed alpha
Helix 113	AM5	c	126	152	Right-handed alpha
Helix 114	AM6	c	169	191	Right-handed alpha
Helix 115	AM7	c	194	201	Right-handed alpha
Helix 116	AM8	c	204	211	Right-handed alpha
Helix 117	AM9	a	70	75	Right-handed alpha
Helix 118	AN1	a	76	104	Right-handed alpha
Helix 119	AN2	a	115	123	Right-handed alpha
Helix 120	AN3	a	124	149	Right-handed alpha
Helix 121	AN4	a	168	200	Right-handed alpha
Helix 122	AN5	a	203	211	Right-handed alpha
Helix 123	AN6	b	57	62	Right-handed alpha
Helix 124	AN7	b	63	91	Right-handed alpha
Helix 125	AN8	b	95	99	Right-handed 310
Helix 126	AN9	b	102	110	Right-handed alpha
Helix 127	AO1	b	111	130	Right-handed alpha
Helix 128	AO2	b	163	192	Right-handed alpha
Helix 129	AO3	b	195	202	Right-handed alpha
Helix 130	AO4	h	72	99	Right-handed alpha
Helix 131	AO5	h	110	115	Right-handed alpha
Helix 132	AO6	h	116	119	Right-handed 310
Helix 133	AO7	h	129	152	Right-handed alpha
Helix 134	AO8	h	183	209	Right-handed alpha
Helix 135	AO9	h	211	220	Right-handed alpha
Helix 136	AP1	e	61	66	Right-handed alpha
Helix 137	AP2	e	67	95	Right-handed alpha
Helix 138	AP3	e	108	113	Right-handed alpha
Helix 139	AP4	e	114	133	Right-handed alpha
Helix 140	AP5	e	158	187	Right-handed alpha
Helix 141	AP6	e	189	196	Right-handed alpha
Helix 142	AP7	k	78	106	Right-handed alpha
Helix 143	AP8	k	110	115	Right-handed alpha
Helix 144	AP9	k	120	134	Right-handed alpha
Helix 145	AQ1	k	139	155	Right-handed alpha
Helix 146	AQ2	k	155	164	Right-handed alpha
Helix 147	AQ3	k	188	210	Right-handed alpha
Helix 148	AQ4	k	217	224	Right-handed alpha
Helix 149	AQ5	f	65	70	Right-handed alpha
Helix 150	AQ6	f	71	99	Right-handed alpha
Helix 151	AQ7	f	103	108	Right-handed alpha
Helix 152	AQ8	f	113	123	Right-handed alpha
Helix 153	AQ9	f	124	150	Right-handed alpha
Helix 154	AR1	f	169	199	Right-handed alpha
Helix 155	AR2	f	202	209	Right-handed alpha
Helix 156	AR3	i	67	72	Right-handed alpha
Helix 157	AR4	i	73	101	Right-handed alpha
Helix 158	AR5	i	112	120	Right-handed alpha
Helix 159	AR6	i	121	141	Right-handed alpha
Helix 160	AR7	i	144	149	Right-handed alpha
Helix 161	AR8	i	175	202	Right-handed alpha
Helix 162	AR9	i	205	212	Right-handed alpha
Helix 163	AS1	j	65	70	Right-handed alpha
Helix 164	AS2	j	71	99	Right-handed alpha
Helix 165	AS3	j	103	108	Right-handed alpha
Helix 166	AS4	j	113	123	Right-handed alpha
Helix 167	AS5	j	124	149	Right-handed alpha
Helix 168	AS6	j	169	200	Right-handed alpha
Helix 169	AS7	j	202	209	Right-handed alpha
Helix 170	AS8	d	67	72	Right-handed alpha
Helix 171	AS9	d	73	101	Right-handed alpha
Helix 172	AT1	d	119	127	Right-handed alpha
Helix 173	AT2	d	127	153	Right-handed alpha
Helix 174	AT3	d	181	210	Right-handed alpha
Helix 175	AT4	d	212	219	Right-handed alpha
Helix 176	AT5	g	65	69	Right-handed 310
Helix 177	AT6	g	74	103	Right-handed alpha
Helix 178	AT7	g	107	113	Right-handed alpha
Helix 179	AT8	g	117	127	Right-handed alpha
Helix 180	AT9	g	138	163	Right-handed alpha
Helix 181	AU1	g	188	216	Right-handed alpha
Helix 182	AU2	g	219	226	Right-handed alpha
Helix 183	AU3	g	243	247	Right-handed 310
Helix 184	AU4	R	61	69	Right-handed 310
Helix 185	AU5	R	72	93	Right-handed alpha
Helix 186	AU6	R	102	110	Right-handed alpha
Helix 187	AU7	R	110	129	Right-handed alpha

There are 13 sheets in PDB entry 8WMW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	136	139	anti-parallel
Strand 3	A	129	130	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	519	first strand
Strand 2	A	522	525	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	624	first strand
Strand 2	A	630	632	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	89	first strand
Strand 2	B	112	114	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	635	first strand
Strand 2	B	638	639	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	68	first strand
Strand 2	C	4	8	anti-parallel
Strand 3	D	118	119	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	62	first strand
Strand 2	D	30	37	anti-parallel
Strand 3	D	85	89	anti-parallel
Strand 4	D	95	99	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	44	first strand
Strand 2	D	50	53	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	53	first strand
Strand 2	E	36	39	anti-parallel
Strand 3	E	21	27	anti-parallel
Strand 4	E	7	10	anti-parallel
Strand 5	E	58	60	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	34	first strand
Strand 2	F	89	90	anti-parallel
Strand 3	F	96	97	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	6	7	first strand
Strand 2	L	17	18	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WMW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WMW