Analysis of interatomic Contacts of Structural Units in PDB entry:
8WMY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WMY entry

There are 2 chains in PDB entry 8WMY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 198
B
 THR 2LYS 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8WMY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 20Right-handed alpha
Helix 2
AA2
A
23 45Right-handed alpha
Helix 3
AA3
A
47 58Right-handed alpha
Helix 4
AA4
A
65 77Right-handed alpha
Helix 5
AA5
A
79 85Right-handed 310
Helix 6
AA6
A
86 94Right-handed alpha
Helix 7
AA7
A
94 104Right-handed alpha
Helix 8
AA8
A
107 116Right-handed alpha
Helix 9
AA9
A
125 138Right-handed alpha
Helix 10
AB1
A
145 156Right-handed alpha
Helix 11
AB2
A
156 175Right-handed alpha
Helix 12
AB3
A
180 198Right-handed alpha
Helix 13
AB4
B
10 20Right-handed alpha
Helix 14
AB5
B
23 45Right-handed alpha
Helix 15
AB6
B
47 58Right-handed alpha
Helix 16
AB7
B
65 76Right-handed alpha
Helix 17
AB8
B
79 85Right-handed 310
Helix 18
AB9
B
86 94Right-handed alpha
Helix 19
AC1
B
94 104Right-handed alpha
Helix 20
AC2
B
107 116Right-handed alpha
Helix 21
AC3
B
125 138Right-handed alpha
Helix 22
AC4
B
145 154Right-handed alpha
Helix 23
AC5
B
156 175Right-handed alpha
Helix 24
AC6
B
180 195Right-handed alpha
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There are no sheets in PDB entry 8WMY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il