Analysis of interatomic Contacts of Structural Units in PDB entry:
8WNT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WNT entry

There are 2 chains in PDB entry 8WNT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 162ALA 630
B
 ALA 35GLN 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8WNT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 175Right-handed alpha
Helix 2
AA2
A
179 207Right-handed alpha
Helix 3
AA3
A
230 236Right-handed alpha
Helix 4
AA4
A
241 247Right-handed alpha
Helix 5
AA5
A
248 255Right-handed alpha
Helix 6
AA6
A
282 286Right-handed 310
Helix 7
AA7
A
287 301Right-handed alpha
Helix 8
AA8
A
324 342Right-handed alpha
Helix 9
AA9
A
350 354Right-handed 310
Helix 10
AB1
A
356 372Right-handed alpha
Helix 11
AB2
A
385 393Right-handed alpha
Helix 12
AB3
A
412 428Right-handed alpha
Helix 13
AB4
A
441 445Right-handed 310
Helix 14
AB5
A
450 459Right-handed alpha
Helix 15
AB6
A
519 532Right-handed alpha
Helix 16
AB7
A
534 540Right-handed alpha
Helix 17
AB8
A
585 589Right-handed 310
Helix 18
AB9
B
41 54Right-handed alpha
Helix 19
AC1
B
60 70Right-handed alpha
Helix 20
AC2
B
71 100Right-handed alpha
Helix 21
AC3
B
107 115Right-handed alpha
Helix 22
AC4
B
115 129Right-handed alpha
Helix 23
AC5
B
129 147Right-handed alpha
Helix 24
AC6
B
157 179Right-handed alpha
Helix 25
AC7
B
180 207Right-handed alpha
Helix 26
AC8
B
207 212Right-handed alpha
Helix 27
AC9
B
234 242Right-handed alpha
Helix 28
AD1
B
249 253Right-handed 310
Helix 29
AD2
B
260 290Right-handed alpha
Helix 30
AD3
B
292 299Right-handed alpha
Helix 31
AD4
B
301 312Right-handed alpha
Helix 32
AD5
B
316 347Right-handed alpha
Helix 33
AD6
B
364 379Right-handed alpha
Helix 34
AD7
B
383 386Right-handed 310
Helix 35
AD8
B
387 413Right-handed alpha
Helix 36
AD9
B
425 445Right-handed alpha
Helix 37
AE1
B
445 458Right-handed alpha
Helix 38
AE2
B
459 467Right-handed alpha
Helix 39
AE3
B
473 492Right-handed alpha
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There are 3 sheets in PDB entry 8WNT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 403first strand
Strand 2
A
377 381parallel
Strand 3
A
346 348parallel
Strand 4
A
305 308parallel
Strand 5
A
260 262parallel
Strand 6
A
225 227parallel
Strand 7
A
463 468parallel
Strand 8
A
432 434parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 545first strand
Strand 2
A
551 557anti-parallel
Strand 3
A
563 569anti-parallel
Strand 4
A
621 627anti-parallel
Strand 5
A
593 599anti-parallel
Strand 6
A
609 611anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
616 617anti-parallel
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