Analysis of interatomic Contacts of Structural Units in PDB entry:
8WO4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WO4 entry

There are 8 chains in PDB entry 8WO4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	CYS 215
B	SER 1	THR 228
C	SER 1	CYS 215
D	SER 1	THR 228
E	ASP 1	ALA 352
F	ASP 1	ALA 352
G	VAL 2	SER 113
H	VAL 2	SER 113

There are 39 helices in PDB entry 8WO4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	122	128	Right-handed alpha
Helix 3	AA3	A	184	189	Right-handed alpha
Helix 4	AA4	B	62	65	Right-handed 310
Helix 5	AA5	B	87	91	Right-handed 310
Helix 6	AA6	B	134	136	Right-handed 310
Helix 7	AA7	B	163	165	Right-handed 310
Helix 8	AA8	B	194	196	Right-handed 310
Helix 9	AA9	B	224	228	Right-handed 310
Helix 10	AB1	C	80	84	Right-handed 310
Helix 11	AB2	C	122	128	Right-handed alpha
Helix 12	AB3	C	184	190	Right-handed alpha
Helix 13	AB4	D	62	65	Right-handed 310
Helix 14	AB5	D	87	91	Right-handed 310
Helix 15	AB6	D	134	136	Right-handed 310
Helix 16	AB7	D	163	165	Right-handed 310
Helix 17	AB8	D	194	196	Right-handed 310
Helix 18	AB9	D	224	228	Right-handed 310
Helix 19	AC1	E	24	28	Right-handed 310
Helix 20	AC2	E	38	53	Right-handed alpha
Helix 21	AC3	E	61	80	Right-handed alpha
Helix 22	AC4	E	114	118	Right-handed 310
Helix 23	AC5	E	139	143	Right-handed 310
Helix 24	AC6	E	144	146	Right-handed 310
Helix 25	AC7	E	180	183	Right-handed 310
Helix 26	AC8	E	244	248	Right-handed 310
Helix 27	AC9	E	341	345	Right-handed 310
Helix 28	AD1	F	38	52	Right-handed alpha
Helix 29	AD2	F	61	82	Right-handed alpha
Helix 30	AD3	F	144	146	Right-handed 310
Helix 31	AD4	F	180	183	Right-handed 310
Helix 32	AD5	F	237	241	Right-handed 310
Helix 33	AD6	F	244	248	Right-handed 310
Helix 34	AD7	F	252	256	Right-handed 310
Helix 35	AD8	F	341	345	Right-handed 310
Helix 36	AD9	G	28	32	Right-handed 310
Helix 37	AE1	G	83	87	Right-handed 310
Helix 38	AE2	H	28	32	Right-handed 310
Helix 39	AE3	H	83	87	Right-handed 310

There are 35 sheets in PDB entry 8WO4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	20	26	anti-parallel
Strand 3	A	71	76	anti-parallel
Strand 4	A	63	68	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	14	first strand
Strand 2	A	103	107	parallel
Strand 3	A	86	91	anti-parallel
Strand 4	A	34	39	anti-parallel
Strand 5	A	46	50	anti-parallel
Strand 6	A	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	119	first strand
Strand 2	A	130	140	anti-parallel
Strand 3	A	174	183	anti-parallel
Strand 4	A	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	146	151	anti-parallel
Strand 3	A	192	198	anti-parallel
Strand 4	A	206	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	8	first strand
Strand 2	B	18	26	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	114	118	parallel
Strand 3	B	92	99	anti-parallel
Strand 4	B	35	40	anti-parallel
Strand 5	B	46	52	anti-parallel
Strand 6	B	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	114	118	parallel
Strand 3	B	92	99	anti-parallel
Strand 4	B	107	109	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	142	152	anti-parallel
Strand 3	B	183	192	anti-parallel
Strand 4	B	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	139	first strand
Strand 2	B	142	152	anti-parallel
Strand 3	B	183	192	anti-parallel
Strand 4	B	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	161	first strand
Strand 2	B	201	207	anti-parallel
Strand 3	B	212	218	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	8	first strand
Strand 2	C	20	26	anti-parallel
Strand 3	C	71	76	anti-parallel
Strand 4	C	63	68	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	13	first strand
Strand 2	C	103	106	parallel
Strand 3	C	86	91	anti-parallel
Strand 4	C	34	39	anti-parallel
Strand 5	C	46	50	anti-parallel
Strand 6	C	54	55	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	119	first strand
Strand 2	C	130	140	anti-parallel
Strand 3	C	174	183	anti-parallel
Strand 4	C	160	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	146	151	anti-parallel
Strand 3	C	192	198	anti-parallel
Strand 4	C	206	211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	8	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	84	anti-parallel
Strand 4	D	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	114	118	parallel
Strand 3	D	92	100	anti-parallel
Strand 4	D	35	40	anti-parallel
Strand 5	D	47	52	anti-parallel
Strand 6	D	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	114	118	parallel
Strand 3	D	92	100	anti-parallel
Strand 4	D	106	107	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	131	first strand
Strand 2	D	142	152	anti-parallel
Strand 3	D	183	192	anti-parallel
Strand 4	D	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	138	139	first strand
Strand 2	D	142	152	anti-parallel
Strand 3	D	183	192	anti-parallel
Strand 4	D	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	201	207	anti-parallel
Strand 3	D	212	218	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	6	first strand
Strand 2	F	2	6	anti-parallel
Strand 3	F	13	22	anti-parallel
Strand 4	E	18	22	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	90	first strand
Strand 2	E	132	135	parallel
Strand 3	E	56	57	parallel
Strand 4	E	148	149	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	153	157	first strand
Strand 2	E	168	171	anti-parallel

Back to list of sheets
Back to top of page

There are 14 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	329	331	first strand
Strand 2	E	322	325	anti-parallel
Strand 3	E	273	276	anti-parallel
Strand 4	E	210	217	anti-parallel
Strand 5	E	200	206	anti-parallel
Strand 6	E	192	196	anti-parallel
Strand 7	E	185	189	anti-parallel
Strand 8	F	185	189	anti-parallel
Strand 9	F	192	196	anti-parallel
Strand 10	F	200	206	anti-parallel
Strand 11	F	210	217	anti-parallel
Strand 12	F	273	277	anti-parallel
Strand 13	F	321	324	anti-parallel
Strand 14	F	329	331	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	284	285	first strand
Strand 2	E	310	312	parallel
Strand 3	E	336	337	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	57	first strand
Strand 2	F	148	149	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	91	first strand
Strand 2	F	132	136	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	284	287	first strand
Strand 2	F	310	313	parallel
Strand 3	F	335	337	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	21	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	17	19	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	21	25	anti-parallel
Strand 3	G	77	82	anti-parallel
Strand 4	G	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	46	51	anti-parallel
Strand 3	G	33	39	anti-parallel
Strand 4	G	88	95	anti-parallel
Strand 5	G	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	46	51	anti-parallel
Strand 3	G	33	39	anti-parallel
Strand 4	G	88	95	anti-parallel
Strand 5	G	107	109	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	17	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	72	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	88	95	anti-parallel
Strand 5	H	100	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	57	59	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	33	39	anti-parallel
Strand 4	H	88	95	anti-parallel
Strand 5	H	107	109	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WO4

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WO4