Analysis of interatomic Contacts of Structural Units in PDB entry:
8WOS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WOS entry

There are 2 chains in PDB entry 8WOS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 36	ASP 822
B	ARG 36	ASP 822

There are 37 helices in PDB entry 8WOS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	43	Right-handed alpha
Helix 2	AA2	A	268	272	Right-handed 310
Helix 3	AA3	A	302	336	Right-handed alpha
Helix 4	AA4	A	443	474	Right-handed alpha
Helix 5	AA5	A	482	486	Right-handed 310
Helix 6	AA6	A	495	500	Right-handed alpha
Helix 7	AA7	A	501	529	Right-handed alpha
Helix 8	AA8	A	531	536	Right-handed alpha
Helix 9	AA9	A	542	565	Right-handed alpha
Helix 10	AB1	A	567	571	Right-handed 310
Helix 11	AB2	A	575	594	Right-handed alpha
Helix 12	AB3	A	601	622	Right-handed alpha
Helix 13	AB4	A	626	649	Right-handed alpha
Helix 14	AB5	A	689	709	Right-handed alpha
Helix 15	AB6	A	713	740	Right-handed alpha
Helix 16	AB7	A	745	768	Right-handed alpha
Helix 17	AB8	A	776	781	Right-handed alpha
Helix 18	AB9	A	794	817	Right-handed alpha
Helix 19	AC1	A	818	820	Right-handed 310
Helix 20	AC2	B	38	43	Right-handed alpha
Helix 21	AC3	B	302	336	Right-handed alpha
Helix 22	AC4	B	443	474	Right-handed alpha
Helix 23	AC5	B	482	486	Right-handed 310
Helix 24	AC6	B	495	500	Right-handed alpha
Helix 25	AC7	B	501	529	Right-handed alpha
Helix 26	AC8	B	531	536	Right-handed alpha
Helix 27	AC9	B	542	565	Right-handed alpha
Helix 28	AD1	B	567	571	Right-handed 310
Helix 29	AD2	B	576	594	Right-handed alpha
Helix 30	AD3	B	601	621	Right-handed alpha
Helix 31	AD4	B	626	649	Right-handed alpha
Helix 32	AD5	B	689	709	Right-handed alpha
Helix 33	AD6	B	713	740	Right-handed alpha
Helix 34	AD7	B	745	768	Right-handed alpha
Helix 35	AD8	B	776	782	Right-handed alpha
Helix 36	AD9	B	794	817	Right-handed alpha
Helix 37	AE1	B	818	822	Right-handed 310

There are 10 sheets in PDB entry 8WOS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	56	first strand
Strand 2	A	157	164	anti-parallel
Strand 3	A	79	83	anti-parallel
Strand 4	A	124	128	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	70	first strand
Strand 2	A	141	150	anti-parallel
Strand 3	A	94	98	anti-parallel
Strand 4	A	103	107	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	114	first strand
Strand 2	A	118	122	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	170	171	first strand
Strand 2	A	187	192	parallel
Strand 3	A	257	264	anti-parallel
Strand 4	A	213	218	anti-parallel
Strand 5	A	237	240	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	291	299	anti-parallel
Strand 3	A	199	205	anti-parallel
Strand 4	A	243	249	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	56	first strand
Strand 2	B	157	164	anti-parallel
Strand 3	B	79	83	anti-parallel
Strand 4	B	124	128	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	70	first strand
Strand 2	B	141	150	anti-parallel
Strand 3	B	94	98	anti-parallel
Strand 4	B	103	107	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	114	first strand
Strand 2	B	118	122	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	171	first strand
Strand 2	B	187	192	parallel
Strand 3	B	257	264	anti-parallel
Strand 4	B	213	218	anti-parallel
Strand 5	B	237	240	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	181	first strand
Strand 2	B	291	299	anti-parallel
Strand 3	B	199	205	anti-parallel
Strand 4	B	243	249	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WOS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WOS