Analysis of interatomic Contacts of Structural Units in PDB entry:
8WOW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WOW entry

There are 2 chains in PDB entry 8WOW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASN 342
B
 SER 4TYR 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8WOW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
40 50Right-handed alpha
Helix 3
AA3
A
51 55Right-handed 310
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
90 97Right-handed alpha
Helix 6
AA6
A
97 119Right-handed alpha
Helix 7
AA7
A
131 134Right-handed 310
Helix 8
AA8
A
151 171Right-handed alpha
Helix 9
AA9
A
203 213Right-handed alpha
Helix 10
AB1
A
240 254Right-handed alpha
Helix 11
AB2
A
274 286Right-handed alpha
Helix 12
AB3
A
308 316Right-handed alpha
Helix 13
AB4
A
322 337Right-handed alpha
Helix 14
AB5
B
12 25Right-handed alpha
Helix 15
AB6
B
40 51Right-handed alpha
Helix 16
AB7
B
52 55Right-handed 310
Helix 17
AB8
B
66 76Right-handed alpha
Helix 18
AB9
B
90 97Right-handed alpha
Helix 19
AC1
B
97 119Right-handed alpha
Helix 20
AC2
B
131 134Right-handed 310
Helix 21
AC3
B
151 171Right-handed alpha
Helix 22
AC4
B
203 213Right-handed alpha
Helix 23
AC5
B
240 255Right-handed alpha
Helix 24
AC6
B
274 286Right-handed alpha
Helix 25
AC7
B
308 316Right-handed alpha
Helix 26
AC8
B
322 337Right-handed alpha
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There are 7 sheets in PDB entry 8WOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
28 33parallel
Strand 3
A
4 8parallel
Strand 4
A
81 84parallel
Strand 5
A
123 129parallel
Strand 6
A
175 181parallel
Strand 7
A
261 266parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
237 239parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
291 294parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
272 273anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
29 33parallel
Strand 3
B
5 8parallel
Strand 4
B
81 84parallel
Strand 5
B
123 129parallel
Strand 6
B
175 181parallel
Strand 7
B
261 266parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 185first strand
Strand 2
B
234 239parallel
Strand 3
B
271 273anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 222first strand
Strand 2
B
291 294parallel
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