Analysis of interatomic Contacts of Structural Units in PDB entry:
8WP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WP0 entry

There is 1 chain in PDB entry 8WP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 21ARG 1251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 8WP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 44Right-handed alpha
Helix 2
AA2
A
46 51Right-handed alpha
Helix 3
AA3
A
54 72Right-handed alpha
Helix 4
AA4
A
88 102Right-handed alpha
Helix 5
AA5
A
112 127Right-handed alpha
Helix 6
AA6
A
131 135Right-handed 310
Helix 7
AA7
A
143 150Right-handed alpha
Helix 8
AA8
A
150 160Right-handed alpha
Helix 9
AA9
A
163 184Right-handed alpha
Helix 10
AB1
A
186 191Right-handed alpha
Helix 11
AB2
A
193 200Right-handed alpha
Helix 12
AB3
A
203 221Right-handed alpha
Helix 13
AB4
A
225 233Right-handed alpha
Helix 14
AB5
A
233 240Right-handed alpha
Helix 15
AB6
A
254 263Right-handed alpha
Helix 16
AB7
A
265 274Right-handed alpha
Helix 17
AB8
A
275 280Right-handed alpha
Helix 18
AB9
A
282 294Right-handed alpha
Helix 19
AC1
A
302 316Right-handed alpha
Helix 20
AC2
A
317 319Right-handed 310
Helix 21
AC3
A
321 325Right-handed 310
Helix 22
AC4
A
326 339Right-handed alpha
Helix 23
AC5
A
406 411Right-handed alpha
Helix 24
AC6
A
460 464Right-handed 310
Helix 25
AC7
A
470 479Right-handed alpha
Helix 26
AC8
A
483 487Right-handed 310
Helix 27
AC9
A
512 520Right-handed alpha
Helix 28
AD1
A
540 547Right-handed alpha
Helix 29
AD2
A
561 565Right-handed 310
Helix 30
AD3
A
595 605Right-handed alpha
Helix 31
AD4
A
621 632Right-handed alpha
Helix 32
AD5
A
661 666Right-handed alpha
Helix 33
AD6
A
671 679Right-handed alpha
Helix 34
AD7
A
684 689Right-handed alpha
Helix 35
AD8
A
700 715Right-handed alpha
Helix 36
AD9
A
731 737Right-handed alpha
Helix 37
AE1
A
739 751Right-handed alpha
Helix 38
AE2
A
753 758Right-handed alpha
Helix 39
AE3
A
759 772Right-handed alpha
Helix 40
AE4
A
775 780Right-handed alpha
Helix 41
AE5
A
800 805Right-handed alpha
Helix 42
AE6
A
808 813Right-handed alpha
Helix 43
AE7
A
813 818Right-handed alpha
Helix 44
AE8
A
824 829Right-handed alpha
Helix 45
AE9
A
832 853Right-handed alpha
Helix 46
AF1
A
860 865Right-handed alpha
Helix 47
AF2
A
866 873Right-handed alpha
Helix 48
AF3
A
878 883Right-handed alpha
Helix 49
AF4
A
884 886Right-handed 310
Helix 50
AF5
A
887 892Right-handed alpha
Helix 51
AF6
A
900 921Right-handed alpha
Helix 52
AF7
A
921 926Right-handed alpha
Helix 53
AF8
A
927 941Right-handed alpha
Helix 54
AF9
A
949 959Right-handed alpha
Helix 55
AG1
A
959 967Right-handed alpha
Helix 56
AG2
A
969 975Right-handed alpha
Helix 57
AG3
A
1054 1059Right-handed alpha
Helix 58
AG4
A
1084 1086Right-handed 310
Helix 59
AG5
A
1117 1123Right-handed alpha
Helix 60
AG6
A
1127 1133Right-handed alpha
Helix 61
AG7
A
1150 1165Right-handed alpha
Helix 62
AG8
A
1189 1194Right-handed alpha
Helix 63
AG9
A
1240 1247Right-handed alpha
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There are 7 sheets in PDB entry 8WP0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 371first strand
Strand 2
A
421 426anti-parallel
Strand 3
A
429 430anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
558 559first strand
Strand 2
A
398 399parallel
Strand 3
A
572 574parallel
Strand 4
A
579 581anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 445first strand
Strand 2
A
524 526parallel
Strand 3
A
554 556parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
645 647first strand
Strand 2
A
655 657anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1034first strand
Strand 2
A
1011 1017anti-parallel
Strand 3
A
1069 1071anti-parallel
Strand 4
A
1074 1075anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1042 1043first strand
Strand 2
A
1199 1203parallel
Strand 3
A
1169 1171parallel
Strand 4
A
1088 1090parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1217 1220first strand
Strand 2
A
1223 1227anti-parallel
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