Analysis of interatomic Contacts of Structural Units in PDB entry:
8WQG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WQG entry

There are 6 chains in PDB entry 8WQG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ASP 2	PRO 97
F	ARG 21	LYS 105
B	MET 17	CYS 112
C	THR 1	ALA 745
J	PHE 22	LYS 105
E	THR 1	LEU 163

There are150 helices in PDB entry 8WQG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	23	36	Right-handed alpha
Helix 2	AA2	D	38	42	Right-handed 310
Helix 3	AA3	F	81	88	Right-handed alpha
Helix 4	AA4	B	33	37	Right-handed alpha
Helix 5	AA5	B	39	47	Right-handed alpha
Helix 6	AA6	B	66	83	Right-handed alpha
Helix 7	AA7	B	96	110	Right-handed alpha
Helix 8	AA8	C	9	26	Right-handed alpha
Helix 9	AA9	C	31	47	Right-handed alpha
Helix 10	AB1	C	53	79	Right-handed alpha
Helix 11	AB2	C	82	105	Right-handed alpha
Helix 12	AB3	C	105	112	Right-handed alpha
Helix 13	AB4	C	138	151	Right-handed alpha
Helix 14	AB5	C	156	173	Right-handed alpha
Helix 15	AB6	C	177	190	Right-handed alpha
Helix 16	AB7	C	200	207	Right-handed alpha
Helix 17	AB8	C	207	230	Right-handed alpha
Helix 18	AB9	C	231	252	Right-handed alpha
Helix 19	AC1	C	255	257	Right-handed 310
Helix 20	AC2	C	258	271	Right-handed alpha
Helix 21	AC3	C	274	288	Right-handed alpha
Helix 22	AC4	C	290	304	Right-handed alpha
Helix 23	AC5	C	307	327	Right-handed alpha
Helix 24	AC6	C	331	333	Right-handed 310
Helix 25	AC7	C	334	359	Right-handed alpha
Helix 26	AC8	C	361	377	Right-handed alpha
Helix 27	AC9	C	386	400	Right-handed alpha
Helix 28	AD1	C	407	423	Right-handed alpha
Helix 29	AD2	C	424	426	Right-handed 310
Helix 30	AD3	C	427	445	Right-handed alpha
Helix 31	AD4	C	454	466	Right-handed alpha
Helix 32	AD5	C	471	496	Right-handed alpha
Helix 33	AD6	C	533	548	Right-handed alpha
Helix 34	AD7	C	579	587	Right-handed alpha
Helix 35	AD8	C	588	590	Right-handed 310
Helix 36	AD9	C	595	603	Right-handed alpha
Helix 37	AE1	C	606	620	Right-handed alpha
Helix 38	AE2	C	664	692	Right-handed alpha
Helix 39	AE3	C	695	707	Right-handed alpha
Helix 40	AE4	C	714	728	Right-handed alpha
Helix 41	AE5	J	53	58	Right-handed alpha
Helix 42	AE6	J	80	91	Right-handed alpha
Helix 43	AE7	E	9	25	Right-handed alpha
Helix 44	AE8	E	31	47	Right-handed alpha
Helix 45	AE9	E	53	79	Right-handed alpha
Helix 46	AF1	E	82	105	Right-handed alpha
Helix 47	AF2	E	107	112	Right-handed alpha
Helix 48	AF3	E	140	145	Right-handed alpha
Helix 49	AF4	E	155	173	Right-handed alpha
Helix 50	AF5	E	177	192	Right-handed alpha
Helix 51	AF6	E	201	206	Right-handed alpha
Helix 52	AF7	E	207	230	Right-handed alpha
Helix 53	AF8	E	231	254	Right-handed alpha
Helix 54	AF9	E	255	257	Right-handed 310
Helix 55	AG1	E	258	271	Right-handed alpha
Helix 56	AG2	E	274	288	Right-handed alpha
Helix 57	AG3	E	290	302	Right-handed alpha
Helix 58	AG4	E	307	327	Right-handed alpha
Helix 59	AG5	E	334	357	Right-handed alpha
Helix 60	AG6	E	361	376	Right-handed alpha
Helix 61	AG7	E	386	400	Right-handed alpha
Helix 62	AG8	E	407	423	Right-handed alpha
Helix 63	AG9	E	427	443	Right-handed alpha
Helix 64	AH1	E	450	465	Right-handed alpha
Helix 65	AH2	E	470	495	Right-handed alpha
Helix 66	AH3	E	533	547	Right-handed alpha
Helix 67	AH4	E	556	559	Right-handed 310
Helix 68	AH5	E	579	591	Right-handed alpha
Helix 69	AH6	E	596	604	Right-handed alpha
Helix 70	AH7	E	606	620	Right-handed alpha
Helix 71	AH8	E	664	689	Right-handed alpha
Helix 72	AH9	E	695	707	Right-handed alpha
Helix 73	AI1	E	714	723	Right-handed alpha
Helix 74	AI2	E	723	728	Right-handed alpha
Helix 75	AI3	N	22	33	Right-handed alpha
Helix 76	AI4	N	37	41	Right-handed 310
Helix 77	AI5	N	55	59	Right-handed 310
Helix 78	AI6	H	33	37	Right-handed alpha
Helix 79	AI7	H	39	47	Right-handed alpha
Helix 80	AI8	H	66	84	Right-handed alpha
Helix 81	AI9	I	23	28	Right-handed alpha
Helix 82	AJ1	I	28	36	Right-handed alpha
Helix 83	AJ2	I	38	40	Right-handed 310
Helix 84	AJ3	I	56	60	Right-handed 310
Helix 85	AJ4	K	22	31	Right-handed alpha
Helix 86	AJ5	A	2	15	Right-handed alpha
Helix 87	AJ6	A	17	25	Right-handed alpha
Helix 88	AJ7	A	28	36	Right-handed alpha
Helix 89	AJ8	A	48	56	Right-handed alpha
Helix 90	AJ9	A	58	68	Right-handed alpha
Helix 91	AK1	A	90	98	Right-handed alpha
Helix 92	AK2	A	100	111	Right-handed alpha
Helix 93	AK3	A	123	132	Right-handed alpha
Helix 94	AK4	A	133	143	Right-handed alpha
Helix 95	AK5	A	156	164	Right-handed alpha
Helix 96	AK6	A	166	176	Right-handed alpha
Helix 97	AK7	A	189	198	Right-handed alpha
Helix 98	AK8	A	199	209	Right-handed alpha
Helix 99	AK9	A	221	229	Right-handed alpha
Helix 100	AL1	A	231	239	Right-handed alpha
Helix 101	AL2	A	246	262	Right-handed alpha
Helix 102	AL3	A	269	284	Right-handed alpha
Helix 103	AL4	A	310	316	Right-handed alpha
Helix 104	AL5	A	320	337	Right-handed alpha
Helix 105	AL6	A	343	357	Right-handed alpha
Helix 106	AL7	A	360	377	Right-handed alpha
Helix 107	AL8	A	381	398	Right-handed alpha
Helix 108	AL9	A	403	428	Right-handed alpha
Helix 109	AM1	A	432	456	Right-handed alpha
Helix 110	AM2	A	460	477	Right-handed alpha
Helix 111	AM3	A	486	492	Right-handed alpha
Helix 112	AM4	A	511	521	Right-handed alpha
Helix 113	AM5	A	534	540	Right-handed alpha
Helix 114	AM6	A	549	560	Right-handed alpha
Helix 115	AM7	A	582	593	Right-handed alpha
Helix 116	AM8	A	596	609	Right-handed alpha
Helix 117	AM9	A	617	627	Right-handed alpha
Helix 118	AN1	G	2	15	Right-handed alpha
Helix 119	AN2	G	17	25	Right-handed alpha
Helix 120	AN3	G	28	36	Right-handed alpha
Helix 121	AN4	G	48	56	Right-handed alpha
Helix 122	AN5	G	58	68	Right-handed alpha
Helix 123	AN6	G	90	98	Right-handed alpha
Helix 124	AN7	G	100	111	Right-handed alpha
Helix 125	AN8	G	123	132	Right-handed alpha
Helix 126	AN9	G	133	143	Right-handed alpha
Helix 127	AO1	G	156	164	Right-handed alpha
Helix 128	AO2	G	166	176	Right-handed alpha
Helix 129	AO3	G	189	198	Right-handed alpha
Helix 130	AO4	G	199	209	Right-handed alpha
Helix 131	AO5	G	221	229	Right-handed alpha
Helix 132	AO6	G	231	239	Right-handed alpha
Helix 133	AO7	G	246	262	Right-handed alpha
Helix 134	AO8	G	269	284	Right-handed alpha
Helix 135	AO9	G	310	317	Right-handed alpha
Helix 136	AP1	G	320	337	Right-handed alpha
Helix 137	AP2	G	343	357	Right-handed alpha
Helix 138	AP3	G	359	377	Right-handed alpha
Helix 139	AP4	G	381	398	Right-handed alpha
Helix 140	AP5	G	403	428	Right-handed alpha
Helix 141	AP6	G	429	457	Right-handed alpha
Helix 142	AP7	G	460	477	Right-handed alpha
Helix 143	AP8	G	486	492	Right-handed alpha
Helix 144	AP9	G	502	506	Right-handed 310
Helix 145	AQ1	G	511	521	Right-handed alpha
Helix 146	AQ2	G	535	540	Right-handed alpha
Helix 147	AQ3	G	548	563	Right-handed alpha
Helix 148	AQ4	G	582	593	Right-handed alpha
Helix 149	AQ5	G	598	603	Right-handed alpha
Helix 150	AQ6	G	617	627	Right-handed alpha

There are 15 sheets in PDB entry 8WQG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	50	first strand
Strand 2	D	45	46	anti-parallel
Strand 3	D	73	76	anti-parallel
Strand 4	D	3	9	parallel
Strand 5	D	12	18	anti-parallel
Strand 6	B	29	32	parallel
Strand 7	B	18	22	anti-parallel
Strand 8	B	60	61	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	24	28	first strand
Strand 2	E	561	565	anti-parallel
Strand 3	E	574	578	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	510	513	first strand
Strand 2	F	30	35	parallel
Strand 3	E	551	553	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	71	first strand
Strand 2	F	79	80	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	513	first strand
Strand 2	J	23	35	parallel
Strand 3	C	551	555	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	513	first strand
Strand 2	J	23	35	parallel
Strand 3	C	561	565	anti-parallel
Strand 4	C	574	578	anti-parallel
Strand 5	C	650	652	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	593	594	first strand
Strand 2	C	638	640	anti-parallel
Strand 3	C	623	625	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	41	42	first strand
Strand 2	J	47	48	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	594	595	first strand
Strand 2	E	637	640	anti-parallel
Strand 3	E	623	625	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	731	733	first strand
Strand 2	E	741	743	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	61	first strand
Strand 2	H	18	22	parallel
Strand 3	H	28	32	anti-parallel
Strand 4	I	12	18	parallel
Strand 5	I	3	9	anti-parallel
Strand 6	I	73	79	parallel
Strand 7	I	42	46	anti-parallel
Strand 8	I	49	50	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	45	47	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	85	89	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	40	41	first strand
Strand 2	G	46	47	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	81	first strand
Strand 2	G	84	89	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WQG

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WQG