Analysis of interatomic Contacts of Structural Units in PDB entry:
8WRO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WRO entry

There are 4 chains in PDB entry 8WRO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	PRO 1137
B	GLN 14	PRO 1137
C	GLN 14	PRO 1137
D	SER 19	PRO 612

There are 81 helices in PDB entry 8WRO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	291	300	Right-handed alpha
Helix 2	AA2	A	334	340	Right-handed alpha
Helix 3	AA3	A	361	368	Right-handed 310
Helix 4	AA4	A	401	405	Right-handed 310
Helix 5	AA5	A	734	740	Right-handed alpha
Helix 6	AA6	A	743	751	Right-handed alpha
Helix 7	AA7	A	752	754	Right-handed 310
Helix 8	AA8	A	756	775	Right-handed alpha
Helix 9	AA9	A	776	778	Right-handed 310
Helix 10	AB1	A	813	823	Right-handed alpha
Helix 11	AB2	A	847	852	Right-handed alpha
Helix 12	AB3	A	863	881	Right-handed alpha
Helix 13	AB4	A	883	887	Right-handed 310
Helix 14	AB5	A	894	905	Right-handed alpha
Helix 15	AB6	A	912	915	Right-handed 310
Helix 16	AB7	A	916	938	Right-handed alpha
Helix 17	AB8	A	942	964	Right-handed alpha
Helix 18	AB9	A	973	981	Right-handed alpha
Helix 19	AC1	A	982	987	Right-handed alpha
Helix 20	AC2	A	991	1030	Right-handed alpha
Helix 21	AC3	B	291	301	Right-handed alpha
Helix 22	AC4	B	334	340	Right-handed alpha
Helix 23	AC5	B	380	384	Right-handed 310
Helix 24	AC6	B	403	407	Right-handed 310
Helix 25	AC7	B	414	419	Right-handed alpha
Helix 26	AC8	B	735	740	Right-handed alpha
Helix 27	AC9	B	743	751	Right-handed alpha
Helix 28	AD1	B	756	774	Right-handed alpha
Helix 29	AD2	B	775	780	Right-handed alpha
Helix 30	AD3	B	813	823	Right-handed alpha
Helix 31	AD4	B	849	853	Right-handed 310
Helix 32	AD5	B	863	881	Right-handed alpha
Helix 33	AD6	B	883	887	Right-handed 310
Helix 34	AD7	B	894	905	Right-handed alpha
Helix 35	AD8	B	910	916	Right-handed alpha
Helix 36	AD9	B	916	938	Right-handed alpha
Helix 37	AE1	B	942	961	Right-handed alpha
Helix 38	AE2	B	973	980	Right-handed alpha
Helix 39	AE3	B	982	1030	Right-handed alpha
Helix 40	AE4	C	291	301	Right-handed alpha
Helix 41	AE5	C	404	408	Right-handed 310
Helix 42	AE6	C	499	502	Right-handed 310
Helix 43	AE7	C	734	739	Right-handed alpha
Helix 44	AE8	C	743	751	Right-handed alpha
Helix 45	AE9	C	757	780	Right-handed alpha
Helix 46	AF1	C	813	823	Right-handed alpha
Helix 47	AF2	C	865	881	Right-handed alpha
Helix 48	AF3	C	883	888	Right-handed alpha
Helix 49	AF4	C	894	905	Right-handed alpha
Helix 50	AF5	C	910	916	Right-handed alpha
Helix 51	AF6	C	916	938	Right-handed alpha
Helix 52	AF7	C	939	941	Right-handed 310
Helix 53	AF8	C	942	961	Right-handed alpha
Helix 54	AF9	C	962	965	Right-handed 310
Helix 55	AG1	C	973	980	Right-handed alpha
Helix 56	AG2	C	982	985	Right-handed 310
Helix 57	AG3	C	986	1030	Right-handed alpha
Helix 58	AG4	D	20	53	Right-handed alpha
Helix 59	AG5	D	55	81	Right-handed alpha
Helix 60	AG6	D	90	101	Right-handed alpha
Helix 61	AG7	D	109	129	Right-handed alpha
Helix 62	AG8	D	147	154	Right-handed alpha
Helix 63	AG9	D	157	194	Right-handed alpha
Helix 64	AH1	D	198	204	Right-handed alpha
Helix 65	AH2	D	218	252	Right-handed alpha
Helix 66	AH3	D	265	268	Right-handed 310
Helix 67	AH4	D	293	301	Right-handed alpha
Helix 68	AH5	D	303	319	Right-handed alpha
Helix 69	AH6	D	325	331	Right-handed alpha
Helix 70	AH7	D	365	385	Right-handed alpha
Helix 71	AH8	D	397	412	Right-handed alpha
Helix 72	AH9	D	414	421	Right-handed alpha
Helix 73	AI1	D	431	446	Right-handed alpha
Helix 74	AI2	D	448	465	Right-handed alpha
Helix 75	AI3	D	475	484	Right-handed alpha
Helix 76	AI4	D	498	502	Right-handed 310
Helix 77	AI5	D	503	508	Right-handed alpha
Helix 78	AI6	D	512	533	Right-handed alpha
Helix 79	AI7	D	547	559	Right-handed alpha
Helix 80	AI8	D	565	575	Right-handed alpha
Helix 81	AI9	D	581	597	Right-handed alpha

There are 48 sheets in PDB entry 8WRO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	52	first strand
Strand 2	A	268	276	anti-parallel
Strand 3	A	282	287	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	262	265	anti-parallel
Strand 3	A	87	91	anti-parallel
Strand 4	A	186	192	anti-parallel
Strand 5	A	198	205	anti-parallel
Strand 6	A	221	226	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	128	first strand
Strand 2	A	113	118	anti-parallel
Strand 3	A	100	104	anti-parallel
Strand 4	A	234	235	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	311	first strand
Strand 2	A	592	596	anti-parallel
Strand 3	A	606	610	anti-parallel
Strand 4	A	645	648	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	325	first strand
Strand 2	A	536	540	parallel
Strand 3	A	543	550	anti-parallel
Strand 4	A	581	585	anti-parallel
Strand 5	A	570	574	anti-parallel
Strand 6	A	562	564	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	356	first strand
Strand 2	A	391	394	anti-parallel
Strand 3	A	510	512	anti-parallel
Strand 4	A	427	434	anti-parallel
Strand 5	A	374	376	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	353	356	first strand
Strand 2	A	391	394	anti-parallel
Strand 3	A	510	512	anti-parallel
Strand 4	A	427	434	anti-parallel
Strand 5	A	505	508	anti-parallel
Strand 6	A	396	399	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	449	451	first strand
Strand 2	A	489	491	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	664	first strand
Strand 2	A	667	671	anti-parallel
Strand 3	A	689	693	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	699	700	first strand
Strand 2	B	785	786	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	725	first strand
Strand 2	A	1056	1074	anti-parallel
Strand 3	A	1044	1053	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	725	first strand
Strand 2	A	1056	1074	anti-parallel
Strand 3	A	1091	1094	anti-parallel
Strand 4	A	1099	1102	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	732	first strand
Strand 2	A	856	858	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1120	first strand
Strand 2	A	1084	1087	anti-parallel
Strand 3	A	1078	1079	anti-parallel
Strand 4	A	1130	1131	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	27	first strand
Strand 2	B	58	59	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	52	first strand
Strand 2	B	268	271	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	234	239	anti-parallel
Strand 3	B	98	104	anti-parallel
Strand 4	B	113	117	anti-parallel
Strand 5	B	123	128	anti-parallel
Strand 6	B	167	169	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	227	first strand
Strand 2	B	197	203	anti-parallel
Strand 3	B	186	194	anti-parallel
Strand 4	B	87	92	anti-parallel
Strand 5	B	262	266	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	276	first strand
Strand 2	B	282	285	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	324	first strand
Strand 2	B	536	539	parallel
Strand 3	B	545	550	anti-parallel
Strand 4	B	581	585	anti-parallel
Strand 5	B	570	574	anti-parallel
Strand 6	B	562	564	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	355	first strand
Strand 2	B	391	399	anti-parallel
Strand 3	B	505	513	anti-parallel
Strand 4	B	428	434	anti-parallel
Strand 5	B	376	377	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	359	first strand
Strand 2	B	521	522	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	449	451	first strand
Strand 2	B	489	491	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	592	595	first strand
Strand 2	B	606	610	anti-parallel
Strand 3	B	645	648	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	651	652	first strand
Strand 2	B	689	693	parallel
Strand 3	B	667	671	anti-parallel
Strand 4	B	661	664	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	712	first strand
Strand 2	B	1069	1074	anti-parallel
Strand 3	B	1092	1094	anti-parallel
Strand 4	B	1100	1103	anti-parallel
Strand 5	B	1106	1110	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	716	first strand
Strand 2	B	1056	1066	anti-parallel
Strand 3	B	719	725	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	716	first strand
Strand 2	B	1056	1066	anti-parallel
Strand 3	B	1044	1053	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	733	first strand
Strand 2	B	855	857	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1122	first strand
Strand 2	B	1083	1087	anti-parallel
Strand 3	B	1078	1080	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	27	first strand
Strand 2	C	58	59	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	52	first strand
Strand 2	C	268	275	anti-parallel
Strand 3	C	284	287	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	234	239	anti-parallel
Strand 3	C	98	102	anti-parallel
Strand 4	C	115	117	anti-parallel
Strand 5	C	123	125	anti-parallel
Strand 6	C	168	169	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	227	first strand
Strand 2	C	197	206	anti-parallel
Strand 3	C	185	192	anti-parallel
Strand 4	C	87	91	anti-parallel
Strand 5	C	264	265	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	309	first strand
Strand 2	C	591	596	anti-parallel
Strand 3	C	606	610	anti-parallel
Strand 4	C	645	648	anti-parallel
Strand 5	C	639	640	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	322	323	first strand
Strand 2	C	537	538	parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	400	first strand
Strand 2	C	504	509	anti-parallel
Strand 3	C	430	431	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	449	451	first strand
Strand 2	C	489	491	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	551	first strand
Strand 2	C	581	585	anti-parallel
Strand 3	C	572	574	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	662	first strand
Strand 2	C	667	671	anti-parallel
Strand 3	C	689	693	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	708	712	first strand
Strand 2	C	1069	1073	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	716	first strand
Strand 2	C	1056	1066	anti-parallel
Strand 3	C	719	724	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	716	first strand
Strand 2	C	1056	1066	anti-parallel
Strand 3	C	1044	1053	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1117	1122	first strand
Strand 2	C	1083	1087	anti-parallel
Strand 3	C	1078	1080	anti-parallel
Strand 4	C	1130	1131	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1091	1094	first strand
Strand 2	C	1099	1102	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	142	143	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WRO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WRO