Analysis of interatomic Contacts of Structural Units in PDB entry:
8WS2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WS2 entry

There is 1 chain in PDB entry 8WS2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ILE 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8WS2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
75 86Right-handed alpha
Helix 4
AA4
A
143 158Right-handed alpha
Helix 5
AA5
A
177 187Right-handed alpha
Helix 6
AA6
A
196 207Right-handed alpha
Helix 7
AA7
A
229 252Right-handed alpha
Helix 8
AA8
A
253 255Right-handed 310
Helix 9
AA9
A
260 264Right-handed 310
Helix 10
AB1
A
269 274Right-handed alpha
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There are 2 sheets in PDB entry 8WS2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
29 36anti-parallel
Strand 3
A
47 52anti-parallel
Strand 4
A
55 61anti-parallel
Strand 5
A
14 18parallel
Strand 6
A
90 99parallel
Strand 7
A
192 194anti-parallel
Strand 8
A
166 170parallel
Strand 9
A
114 118parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
29 36anti-parallel
Strand 3
A
47 52anti-parallel
Strand 4
A
55 61anti-parallel
Strand 5
A
14 18parallel
Strand 6
A
90 99parallel
Strand 7
A
210 219parallel
Strand 8
A
109 110anti-parallel
Strand 9
A
161 162parallel
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