Analysis of interatomic Contacts of Structural Units in PDB entry:
8WS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WS6 entry

There are 4 chains in PDB entry 8WS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 58GLY 355
C
 G -12 G 6
B
 C -19 G 11
D
 C -6 T 1
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8WS6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 89Right-handed alpha
Helix 2
AA2
A
94 100Right-handed alpha
Helix 3
AA3
A
105 116Right-handed alpha
Helix 4
AA4
A
125 129Right-handed 310
Helix 5
AA5
A
132 149Right-handed alpha
Helix 6
AA6
A
150 169Right-handed alpha
Helix 7
AA7
A
266 270Right-handed 310
Helix 8
AA8
A
287 292Right-handed alpha
Helix 9
AA9
A
309 319Right-handed alpha
Helix 10
AB1
A
327 333Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8WS6.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
340 342anti-parallel
Strand 3
A
347 351anti-parallel
Strand 4
A
60 68anti-parallel
Strand 5
A
303 308anti-parallel
Strand 6
A
295 300anti-parallel
Strand 7
A
207 208anti-parallel
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