Analysis of interatomic Contacts of Structural Units in PDB entry:
8WS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WS7 entry

There are 4 chains in PDB entry 8WS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 58LEU 354
C
 A -10 G 6
B
 C -19 U 10
D
 C -6 C 0
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8WS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 89Right-handed alpha
Helix 2
AA2
A
92 99Right-handed alpha
Helix 3
AA3
A
105 117Right-handed alpha
Helix 4
AA4
A
125 158Right-handed alpha
Helix 5
AA5
A
247 251Right-handed 310
Helix 6
AA6
A
281 292Right-handed alpha
Helix 7
AA7
A
310 319Right-handed alpha
Helix 8
AA8
A
327 332Right-handed alpha
Helix 9
AA9
A
333 335Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8WS7.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
340 342anti-parallel
Strand 3
A
347 351anti-parallel
Strand 4
A
60 68anti-parallel
Strand 5
A
304 307anti-parallel
Strand 6
A
296 299anti-parallel
Strand 7
A
207 208anti-parallel
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