Analysis of interatomic Contacts of Structural Units in PDB entry:
8WTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WTB entry

There are 4 chains in PDB entry 8WTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 18ILE 258
B
 ILE 78LYS 176
C
 LYS 18ILE 258
D
 ILE 78LYS 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8WTB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 62Right-handed alpha
Helix 2
AA2
A
81 91Right-handed alpha
Helix 3
AA3
A
95 101Right-handed alpha
Helix 4
AA4
A
134 151Right-handed alpha
Helix 5
AA5
A
167 171Right-handed 310
Helix 6
AA6
A
183 189Right-handed alpha
Helix 7
AA7
A
191 202Right-handed alpha
Helix 8
AA8
A
232 258Right-handed alpha
Helix 9
AA9
B
87 95Right-handed alpha
Helix 10
AB1
B
101 106Right-handed alpha
Helix 11
AB2
B
106 118Right-handed alpha
Helix 12
AB3
B
129 155Right-handed alpha
Helix 13
AB4
B
157 176Right-handed alpha
Helix 14
AB5
C
46 62Right-handed alpha
Helix 15
AB6
C
81 91Right-handed alpha
Helix 16
AB7
C
95 101Right-handed 310
Helix 17
AB8
C
134 153Right-handed alpha
Helix 18
AB9
C
167 171Right-handed 310
Helix 19
AC1
C
183 189Right-handed alpha
Helix 20
AC2
C
190 202Right-handed alpha
Helix 21
AC3
C
232 258Right-handed alpha
Helix 22
AC4
D
87 95Right-handed alpha
Helix 23
AC5
D
99 106Right-handed alpha
Helix 24
AC6
D
106 118Right-handed alpha
Helix 25
AC7
D
131 155Right-handed alpha
Helix 26
AC8
D
157 175Right-handed alpha
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There are 4 sheets in PDB entry 8WTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
70 76anti-parallel
Strand 3
A
105 109anti-parallel
Strand 4
A
114 118anti-parallel
Strand 5
A
124 130anti-parallel
Strand 6
A
25 34anti-parallel
Strand 7
A
175 182anti-parallel
Strand 8
A
220 225anti-parallel
Strand 9
A
204 208anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
A
162 163anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 66first strand
Strand 2
C
70 76anti-parallel
Strand 3
C
105 109anti-parallel
Strand 4
C
114 118anti-parallel
Strand 5
C
124 130anti-parallel
Strand 6
C
25 34anti-parallel
Strand 7
C
175 182anti-parallel
Strand 8
C
220 225anti-parallel
Strand 9
C
204 208anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 158first strand
Strand 2
C
162 163anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il