Analysis of interatomic Contacts of Structural Units in PDB entry:
8WTM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WTM entry

There are 2 chains in PDB entry 8WTM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 67ASN 733
B
 ARG 67ASN 733
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 58 helices in PDB entry 8WTM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
130 139Right-handed alpha
Helix 2
AA2
A
181 194Right-handed alpha
Helix 3
AA3
A
199 214Right-handed alpha
Helix 4
AA4
A
233 246Right-handed alpha
Helix 5
AA5
A
266 279Right-handed alpha
Helix 6
AA6
A
294 298Right-handed 310
Helix 7
AA7
A
315 317Right-handed 310
Helix 8
AA8
A
318 325Right-handed alpha
Helix 9
AA9
A
338 347Right-handed alpha
Helix 10
AB1
A
354 365Right-handed alpha
Helix 11
AB2
A
366 369Right-handed 310
Helix 12
AB3
A
387 399Right-handed alpha
Helix 13
AB4
A
427 445Right-handed alpha
Helix 14
AB5
A
448 468Right-handed alpha
Helix 15
AB6
A
474 495Right-handed alpha
Helix 16
AB7
A
496 498Right-handed 310
Helix 17
AB8
A
499 506Right-handed alpha
Helix 18
AB9
A
508 514Right-handed alpha
Helix 19
AC1
A
520 532Right-handed alpha
Helix 20
AC2
A
532 552Right-handed alpha
Helix 21
AC3
A
557 582Right-handed alpha
Helix 22
AC4
A
587 605Right-handed alpha
Helix 23
AC5
A
611 615Right-handed 310
Helix 24
AC6
A
619 624Right-handed alpha
Helix 25
AC7
A
628 640Right-handed alpha
Helix 26
AC8
A
649 655Right-handed 310
Helix 27
AC9
A
663 679Right-handed alpha
Helix 28
AD1
A
690 699Right-handed alpha
Helix 29
AD2
A
704 733Right-handed alpha
Helix 30
AD3
B
130 139Right-handed alpha
Helix 31
AD4
B
181 194Right-handed alpha
Helix 32
AD5
B
199 214Right-handed alpha
Helix 33
AD6
B
233 246Right-handed alpha
Helix 34
AD7
B
266 279Right-handed alpha
Helix 35
AD8
B
294 298Right-handed 310
Helix 36
AD9
B
315 317Right-handed 310
Helix 37
AE1
B
318 325Right-handed alpha
Helix 38
AE2
B
338 347Right-handed alpha
Helix 39
AE3
B
354 365Right-handed alpha
Helix 40
AE4
B
366 369Right-handed 310
Helix 41
AE5
B
387 399Right-handed alpha
Helix 42
AE6
B
427 445Right-handed alpha
Helix 43
AE7
B
448 468Right-handed alpha
Helix 44
AE8
B
474 495Right-handed alpha
Helix 45
AE9
B
496 498Right-handed 310
Helix 46
AF1
B
499 506Right-handed alpha
Helix 47
AF2
B
508 514Right-handed alpha
Helix 48
AF3
B
520 532Right-handed alpha
Helix 49
AF4
B
532 552Right-handed alpha
Helix 50
AF5
B
557 582Right-handed alpha
Helix 51
AF6
B
587 605Right-handed alpha
Helix 52
AF7
B
611 615Right-handed 310
Helix 53
AF8
B
619 624Right-handed alpha
Helix 54
AF9
B
628 640Right-handed alpha
Helix 55
AG1
B
649 655Right-handed 310
Helix 56
AG2
B
663 679Right-handed alpha
Helix 57
AG3
B
690 699Right-handed alpha
Helix 58
AG4
B
704 733Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 8WTM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 116first strand
Strand 2
A
72 80anti-parallel
Strand 3
A
147 153anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
252 255parallel
Strand 3
A
283 287parallel
Strand 4
A
120 124parallel
Strand 5
A
301 305parallel
Strand 6
A
310 314anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 116first strand
Strand 2
B
72 80anti-parallel
Strand 3
B
147 153anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 170first strand
Strand 2
B
252 255parallel
Strand 3
B
283 287parallel
Strand 4
B
120 124parallel
Strand 5
B
301 305parallel
Strand 6
B
310 314anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il