Analysis of interatomic Contacts of Structural Units in PDB entry:
8WTO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WTO entry

There are 2 chains in PDB entry 8WTO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 67ARG 735
B
 ARG 67ARG 735
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8WTO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
130 139Right-handed alpha
Helix 2
AA2
A
159 166Right-handed alpha
Helix 3
AA3
A
181 194Right-handed alpha
Helix 4
AA4
A
199 215Right-handed alpha
Helix 5
AA5
A
233 247Right-handed alpha
Helix 6
AA6
A
263 280Right-handed alpha
Helix 7
AA7
A
292 297Right-handed alpha
Helix 8
AA8
A
315 317Right-handed 310
Helix 9
AA9
A
318 327Right-handed alpha
Helix 10
AB1
A
335 349Right-handed alpha
Helix 11
AB2
A
354 368Right-handed alpha
Helix 12
AB3
A
387 397Right-handed alpha
Helix 13
AB4
A
427 445Right-handed alpha
Helix 14
AB5
A
447 468Right-handed alpha
Helix 15
AB6
A
474 496Right-handed alpha
Helix 16
AB7
A
499 505Right-handed alpha
Helix 17
AB8
A
506 515Right-handed alpha
Helix 18
AB9
A
520 532Right-handed alpha
Helix 19
AC1
A
532 552Right-handed alpha
Helix 20
AC2
A
555 583Right-handed alpha
Helix 21
AC3
A
587 605Right-handed alpha
Helix 22
AC4
A
616 618Right-handed 310
Helix 23
AC5
A
619 624Right-handed alpha
Helix 24
AC6
A
628 640Right-handed alpha
Helix 25
AC7
A
651 655Right-handed 310
Helix 26
AC8
A
663 679Right-handed alpha
Helix 27
AC9
A
691 699Right-handed alpha
Helix 28
AD1
A
704 730Right-handed alpha
Helix 29
AD2
B
130 139Right-handed alpha
Helix 30
AD3
B
159 166Right-handed alpha
Helix 31
AD4
B
181 194Right-handed alpha
Helix 32
AD5
B
199 215Right-handed alpha
Helix 33
AD6
B
233 246Right-handed alpha
Helix 34
AD7
B
263 280Right-handed alpha
Helix 35
AD8
B
292 297Right-handed alpha
Helix 36
AD9
B
318 327Right-handed alpha
Helix 37
AE1
B
335 349Right-handed alpha
Helix 38
AE2
B
354 368Right-handed alpha
Helix 39
AE3
B
387 397Right-handed alpha
Helix 40
AE4
B
427 446Right-handed alpha
Helix 41
AE5
B
447 468Right-handed alpha
Helix 42
AE6
B
474 496Right-handed alpha
Helix 43
AE7
B
499 505Right-handed alpha
Helix 44
AE8
B
506 515Right-handed alpha
Helix 45
AE9
B
520 532Right-handed alpha
Helix 46
AF1
B
532 552Right-handed alpha
Helix 47
AF2
B
555 585Right-handed alpha
Helix 48
AF3
B
587 605Right-handed alpha
Helix 49
AF4
B
616 618Right-handed 310
Helix 50
AF5
B
619 624Right-handed alpha
Helix 51
AF6
B
628 640Right-handed alpha
Helix 52
AF7
B
651 655Right-handed 310
Helix 53
AF8
B
663 679Right-handed alpha
Helix 54
AF9
B
691 698Right-handed alpha
Helix 55
AG1
B
704 730Right-handed alpha
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There are 6 sheets in PDB entry 8WTO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 116first strand
Strand 2
A
72 84anti-parallel
Strand 3
A
147 153anti-parallel
Strand 4
A
156 157anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
252 255parallel
Strand 3
A
283 287parallel
Strand 4
A
120 125parallel
Strand 5
A
301 306parallel
Strand 6
A
309 314anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 649first strand
Strand 2
A
687 690anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 116first strand
Strand 2
B
72 84anti-parallel
Strand 3
B
147 153anti-parallel
Strand 4
B
156 157anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 170first strand
Strand 2
B
252 255parallel
Strand 3
B
283 287parallel
Strand 4
B
120 125parallel
Strand 5
B
301 306parallel
Strand 6
B
309 314anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
646 649first strand
Strand 2
B
687 690anti-parallel
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