Analysis of interatomic Contacts of Structural Units in PDB entry:
8WTP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WTP entry

There are 2 chains in PDB entry 8WTP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 67ASN 733
B
 ARG 67ASN 733
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8WTP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
134 139Right-handed alpha
Helix 2
AA2
A
184 194Right-handed alpha
Helix 3
AA3
A
199 214Right-handed alpha
Helix 4
AA4
A
234 245Right-handed alpha
Helix 5
AA5
A
265 279Right-handed alpha
Helix 6
AA6
A
318 327Right-handed alpha
Helix 7
AA7
A
338 347Right-handed alpha
Helix 8
AA8
A
354 359Right-handed alpha
Helix 9
AA9
A
359 365Right-handed alpha
Helix 10
AB1
A
366 369Right-handed 310
Helix 11
AB2
A
387 398Right-handed alpha
Helix 12
AB3
A
430 443Right-handed alpha
Helix 13
AB4
A
457 468Right-handed alpha
Helix 14
AB5
A
474 496Right-handed alpha
Helix 15
AB6
A
499 504Right-handed alpha
Helix 16
AB7
A
509 514Right-handed alpha
Helix 17
AB8
A
521 550Right-handed alpha
Helix 18
AB9
A
557 582Right-handed alpha
Helix 19
AC1
A
589 594Right-handed alpha
Helix 20
AC2
A
594 605Right-handed alpha
Helix 21
AC3
A
611 615Right-handed 310
Helix 22
AC4
A
619 625Right-handed alpha
Helix 23
AC5
A
628 640Right-handed alpha
Helix 24
AC6
A
663 679Right-handed alpha
Helix 25
AC7
A
691 699Right-handed alpha
Helix 26
AC8
A
704 715Right-handed alpha
Helix 27
AC9
A
717 731Right-handed alpha
Helix 28
AD1
B
134 139Right-handed alpha
Helix 29
AD2
B
184 194Right-handed alpha
Helix 30
AD3
B
199 214Right-handed alpha
Helix 31
AD4
B
233 245Right-handed alpha
Helix 32
AD5
B
265 279Right-handed alpha
Helix 33
AD6
B
293 298Right-handed 310
Helix 34
AD7
B
318 327Right-handed alpha
Helix 35
AD8
B
338 347Right-handed alpha
Helix 36
AD9
B
354 359Right-handed alpha
Helix 37
AE1
B
359 365Right-handed alpha
Helix 38
AE2
B
366 369Right-handed 310
Helix 39
AE3
B
387 398Right-handed alpha
Helix 40
AE4
B
430 443Right-handed alpha
Helix 41
AE5
B
457 468Right-handed alpha
Helix 42
AE6
B
474 496Right-handed alpha
Helix 43
AE7
B
499 504Right-handed alpha
Helix 44
AE8
B
509 514Right-handed alpha
Helix 45
AE9
B
521 550Right-handed alpha
Helix 46
AF1
B
557 582Right-handed alpha
Helix 47
AF2
B
589 594Right-handed alpha
Helix 48
AF3
B
594 605Right-handed alpha
Helix 49
AF4
B
611 615Right-handed 310
Helix 50
AF5
B
619 625Right-handed alpha
Helix 51
AF6
B
628 640Right-handed alpha
Helix 52
AF7
B
663 679Right-handed alpha
Helix 53
AF8
B
691 699Right-handed alpha
Helix 54
AF9
B
704 715Right-handed alpha
Helix 55
AG1
B
717 731Right-handed alpha
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There are 9 sheets in PDB entry 8WTP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
72 75anti-parallel
Strand 3
A
151 153anti-parallel
Strand 4
A
156 157anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 111first strand
Strand 2
A
78 80anti-parallel
Strand 3
A
147 148anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
252 256parallel
Strand 3
A
283 287parallel
Strand 4
A
120 124parallel
Strand 5
A
301 305parallel
Strand 6
A
310 314anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 648first strand
Strand 2
A
689 690anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
115 116anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 111first strand
Strand 2
B
78 80anti-parallel
Strand 3
B
147 148anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 170first strand
Strand 2
B
252 255parallel
Strand 3
B
283 286parallel
Strand 4
B
120 124parallel
Strand 5
B
301 305parallel
Strand 6
B
310 314anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
156 157anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
646 648first strand
Strand 2
B
689 690anti-parallel
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