Analysis of interatomic Contacts of Structural Units in PDB entry:
8WTU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WTU entry

There is 1 chain in PDB entry 8WTU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 68ILE 617
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8WTU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
75 89Right-handed alpha
Helix 2
AA2
A
94 121Right-handed alpha
Helix 3
AA3
A
131 133Right-handed 310
Helix 4
AA4
A
134 165Right-handed alpha
Helix 5
AA5
A
187 191Right-handed 310
Helix 6
AA6
A
208 217Right-handed alpha
Helix 7
AA7
A
220 224Right-handed 310
Helix 8
AA8
A
234 251Right-handed alpha
Helix 9
AA9
A
268 283Right-handed alpha
Helix 10
AB1
A
287 295Right-handed alpha
Helix 11
AB2
A
304 319Right-handed alpha
Helix 12
AB3
A
324 331Right-handed alpha
Helix 13
AB4
A
338 373Right-handed alpha
Helix 14
AB5
A
375 380Right-handed alpha
Helix 15
AB6
A
386 396Right-handed alpha
Helix 16
AB7
A
400 435Right-handed alpha
Helix 17
AB8
A
436 440Right-handed 310
Helix 18
AB9
A
441 458Right-handed alpha
Helix 19
AC1
A
459 462Right-handed 310
Helix 20
AC2
A
464 476Right-handed alpha
Helix 21
AC3
A
478 496Right-handed alpha
Helix 22
AC4
A
497 510Right-handed alpha
Helix 23
AC5
A
514 523Right-handed alpha
Helix 24
AC6
A
523 539Right-handed alpha
Helix 25
AC7
A
551 567Right-handed alpha
Helix 26
AC8
A
567 580Right-handed alpha
Helix 27
AC9
A
583 591Right-handed alpha
Helix 28
AD1
A
594 601Right-handed 310
Helix 29
AD2
A
606 609Right-handed 310
Helix 30
AD3
A
610 615Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8WTU.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
544 545first strand
Strand 2
A
548 549anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il