Analysis of interatomic Contacts of Structural Units in PDB entry:
8WU2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WU2 entry

There are 2 chains in PDB entry 8WU2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 307ARG 909
B
 THR 306ALA 911
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 8WU2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
326 332Right-handed alpha
Helix 2
AA2
A
367 373Right-handed alpha
Helix 3
AA3
A
375 382Right-handed alpha
Helix 4
AA4
A
394 406Right-handed alpha
Helix 5
AA5
A
416 436Right-handed alpha
Helix 6
AA6
A
442 448Right-handed alpha
Helix 7
AA7
A
457 461Right-handed 310
Helix 8
AA8
A
467 474Right-handed alpha
Helix 9
AA9
A
476 491Right-handed alpha
Helix 10
AB1
A
525 537Right-handed alpha
Helix 11
AB2
A
538 544Right-handed alpha
Helix 12
AB3
A
554 568Right-handed alpha
Helix 13
AB4
A
579 584Right-handed alpha
Helix 14
AB5
A
585 600Right-handed alpha
Helix 15
AB6
A
602 617Right-handed alpha
Helix 16
AB7
A
648 669Right-handed alpha
Helix 17
AB8
A
672 674Right-handed 310
Helix 18
AB9
A
675 686Right-handed alpha
Helix 19
AC1
A
704 715Right-handed alpha
Helix 20
AC2
A
715 722Right-handed alpha
Helix 21
AC3
A
740 744Right-handed 310
Helix 22
AC4
A
767 777Right-handed alpha
Helix 23
AC5
A
788 804Right-handed alpha
Helix 24
AC6
A
806 820Right-handed alpha
Helix 25
AC7
A
845 855Right-handed alpha
Helix 26
AC8
A
860 864Right-handed 310
Helix 27
AC9
A
868 872Right-handed 310
Helix 28
AD1
A
880 898Right-handed alpha
Helix 29
AD2
B
326 332Right-handed alpha
Helix 30
AD3
B
368 373Right-handed alpha
Helix 31
AD4
B
375 383Right-handed alpha
Helix 32
AD5
B
394 406Right-handed alpha
Helix 33
AD6
B
416 436Right-handed alpha
Helix 34
AD7
B
442 448Right-handed alpha
Helix 35
AD8
B
457 464Right-handed 310
Helix 36
AD9
B
467 475Right-handed alpha
Helix 37
AE1
B
476 490Right-handed alpha
Helix 38
AE2
B
525 537Right-handed alpha
Helix 39
AE3
B
538 544Right-handed alpha
Helix 40
AE4
B
554 556Right-handed 310
Helix 41
AE5
B
557 568Right-handed alpha
Helix 42
AE6
B
579 584Right-handed alpha
Helix 43
AE7
B
585 600Right-handed alpha
Helix 44
AE8
B
602 617Right-handed alpha
Helix 45
AE9
B
648 670Right-handed alpha
Helix 46
AF1
B
672 674Right-handed 310
Helix 47
AF2
B
675 686Right-handed alpha
Helix 48
AF3
B
704 713Right-handed alpha
Helix 49
AF4
B
714 722Right-handed alpha
Helix 50
AF5
B
740 744Right-handed 310
Helix 51
AF6
B
767 775Right-handed alpha
Helix 52
AF7
B
787 804Right-handed alpha
Helix 53
AF8
B
806 820Right-handed alpha
Helix 54
AF9
B
845 854Right-handed alpha
Helix 55
AG1
B
868 872Right-handed 310
Helix 56
AG2
B
880 897Right-handed alpha
Helix 57
AG3
B
906 910Right-handed 310
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There are 7 sheets in PDB entry 8WU2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 353first strand
Strand 2
A
630 637anti-parallel
Strand 3
A
620 627anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 501first strand
Strand 2
A
521 523anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 573first strand
Strand 2
A
698 703anti-parallel
Strand 3
A
691 695anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
750 756first strand
Strand 2
A
759 765anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 353first strand
Strand 2
B
630 637anti-parallel
Strand 3
B
620 627anti-parallel
Strand 4
B
498 501parallel
Strand 5
B
521 523anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
571 573first strand
Strand 2
B
698 703anti-parallel
Strand 3
B
690 695anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
750 756first strand
Strand 2
B
759 765anti-parallel
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