Analysis of interatomic Contacts of Structural Units in PDB entry:
8WU3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WU3 entry

There are 2 chains in PDB entry 8WU3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 11PHE 621
B
 ARG 11PHE 621
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 8WU3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 39Right-handed alpha
Helix 2
AA2
A
72 79Right-handed alpha
Helix 3
AA3
A
82 90Right-handed alpha
Helix 4
AA4
A
101 113Right-handed alpha
Helix 5
AA5
A
123 142Right-handed alpha
Helix 6
AA6
A
149 155Right-handed alpha
Helix 7
AA7
A
164 168Right-handed 310
Helix 8
AA8
A
174 180Right-handed alpha
Helix 9
AA9
A
183 197Right-handed alpha
Helix 10
AB1
A
232 244Right-handed alpha
Helix 11
AB2
A
245 252Right-handed alpha
Helix 12
AB3
A
261 263Right-handed 310
Helix 13
AB4
A
264 276Right-handed alpha
Helix 14
AB5
A
292 307Right-handed alpha
Helix 15
AB6
A
309 324Right-handed alpha
Helix 16
AB7
A
355 377Right-handed alpha
Helix 17
AB8
A
379 381Right-handed 310
Helix 18
AB9
A
382 393Right-handed alpha
Helix 19
AC1
A
412 422Right-handed alpha
Helix 20
AC2
A
422 429Right-handed alpha
Helix 21
AC3
A
447 451Right-handed 310
Helix 22
AC4
A
474 484Right-handed alpha
Helix 23
AC5
A
492 510Right-handed alpha
Helix 24
AC6
A
513 526Right-handed alpha
Helix 25
AC7
A
552 561Right-handed alpha
Helix 26
AC8
A
567 571Right-handed 310
Helix 27
AC9
A
575 579Right-handed 310
Helix 28
AD1
A
587 604Right-handed alpha
Helix 29
AD2
A
614 619Right-handed 310
Helix 30
AD3
B
33 39Right-handed alpha
Helix 31
AD4
B
72 79Right-handed alpha
Helix 32
AD5
B
82 90Right-handed alpha
Helix 33
AD6
B
101 113Right-handed alpha
Helix 34
AD7
B
123 142Right-handed alpha
Helix 35
AD8
B
149 155Right-handed alpha
Helix 36
AD9
B
164 168Right-handed 310
Helix 37
AE1
B
176 182Right-handed alpha
Helix 38
AE2
B
183 198Right-handed alpha
Helix 39
AE3
B
232 244Right-handed alpha
Helix 40
AE4
B
246 252Right-handed alpha
Helix 41
AE5
B
261 263Right-handed 310
Helix 42
AE6
B
264 276Right-handed alpha
Helix 43
AE7
B
286 291Right-handed alpha
Helix 44
AE8
B
292 305Right-handed alpha
Helix 45
AE9
B
309 324Right-handed alpha
Helix 46
AF1
B
355 376Right-handed alpha
Helix 47
AF2
B
379 381Right-handed 310
Helix 48
AF3
B
382 393Right-handed alpha
Helix 49
AF4
B
411 422Right-handed alpha
Helix 50
AF5
B
422 429Right-handed alpha
Helix 51
AF6
B
447 451Right-handed 310
Helix 52
AF7
B
474 484Right-handed alpha
Helix 53
AF8
B
494 511Right-handed alpha
Helix 54
AF9
B
513 526Right-handed alpha
Helix 55
AG1
B
552 561Right-handed alpha
Helix 56
AG2
B
567 571Right-handed 310
Helix 57
AG3
B
575 579Right-handed 310
Helix 58
AG4
B
587 605Right-handed alpha
Helix 59
AG5
B
614 619Right-handed 310
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There are 8 sheets in PDB entry 8WU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
337 344anti-parallel
Strand 3
A
327 334anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
228 230anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
405 411anti-parallel
Strand 3
A
397 402anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 463first strand
Strand 2
A
466 472anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
339 344anti-parallel
Strand 3
B
327 332anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 208first strand
Strand 2
B
228 230anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 280first strand
Strand 2
B
405 410anti-parallel
Strand 3
B
398 402anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
457 463first strand
Strand 2
B
466 472anti-parallel
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