Analysis of interatomic Contacts of Structural Units in PDB entry:
8WU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WU6 entry

There are 2 chains in PDB entry 8WU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 87PHE 309
B
 GLU 82PHE 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8WU6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 107Right-handed alpha
Helix 2
AA2
A
110 116Right-handed alpha
Helix 3
AA3
A
116 132Right-handed alpha
Helix 4
AA4
A
144 148Right-handed 310
Helix 5
AA5
A
149 167Right-handed alpha
Helix 6
AA6
A
184 199Right-handed alpha
Helix 7
AA7
A
213 231Right-handed alpha
Helix 8
AA8
A
235 239Right-handed 310
Helix 9
AA9
A
240 248Right-handed alpha
Helix 10
AB1
A
272 276Right-handed 310
Helix 11
AB2
A
286 290Right-handed 310
Helix 12
AB3
A
291 309Right-handed alpha
Helix 13
AB4
B
84 88Right-handed 310
Helix 14
AB5
B
98 107Right-handed alpha
Helix 15
AB6
B
109 116Right-handed alpha
Helix 16
AB7
B
116 132Right-handed alpha
Helix 17
AB8
B
144 148Right-handed 310
Helix 18
AB9
B
149 168Right-handed alpha
Helix 19
AC1
B
184 199Right-handed alpha
Helix 20
AC2
B
213 231Right-handed alpha
Helix 21
AC3
B
235 239Right-handed 310
Helix 22
AC4
B
240 248Right-handed alpha
Helix 23
AC5
B
272 276Right-handed 310
Helix 24
AC6
B
286 290Right-handed 310
Helix 25
AC7
B
291 309Right-handed alpha
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There are 2 sheets in PDB entry 8WU6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 177first strand
Strand 2
A
205 212parallel
Strand 3
A
135 142parallel
Strand 4
A
92 95parallel
Strand 5
A
257 260parallel
Strand 6
A
279 282parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 177first strand
Strand 2
B
205 212parallel
Strand 3
B
135 142parallel
Strand 4
B
91 95parallel
Strand 5
B
257 260parallel
Strand 6
B
279 282parallel
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