Analysis of interatomic Contacts of Structural Units in PDB entry:
8WV2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WV2 entry

There are 8 chains in PDB entry 8WV2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 551
B	MET 1	ASN 551
C	MET 1	ASN 551
E	MET 1	ASN 551
F	MET 1	ASN 551
G	MET 1	ASN 551
H	MET 1	ASN 551
D	MET 1	ASN 551

There are193 helices in PDB entry 8WV2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	29	Right-handed alpha
Helix 2	AA2	A	31	40	Right-handed alpha
Helix 3	AA3	A	58	67	Right-handed alpha
Helix 4	AA4	A	68	76	Right-handed alpha
Helix 5	AA5	A	78	88	Right-handed alpha
Helix 6	AA6	A	92	112	Right-handed alpha
Helix 7	AA7	A	118	132	Right-handed alpha
Helix 8	AA8	A	132	137	Right-handed alpha
Helix 9	AA9	A	163	167	Right-handed 310
Helix 10	AB1	A	175	184	Right-handed alpha
Helix 11	AB2	A	225	234	Right-handed alpha
Helix 12	AB3	A	249	256	Right-handed alpha
Helix 13	AB4	A	293	307	Right-handed alpha
Helix 14	AB5	A	308	312	Right-handed 310
Helix 15	AB6	A	343	360	Right-handed alpha
Helix 16	AB7	A	373	384	Right-handed alpha
Helix 17	AB8	A	389	394	Right-handed alpha
Helix 18	AB9	A	395	399	Right-handed 310
Helix 19	AC1	A	403	411	Right-handed alpha
Helix 20	AC2	A	417	441	Right-handed alpha
Helix 21	AC3	A	471	481	Right-handed alpha
Helix 22	AC4	A	507	517	Right-handed alpha
Helix 23	AC5	A	519	524	Right-handed 310
Helix 24	AC6	A	538	551	Right-handed alpha
Helix 25	AC7	B	5	29	Right-handed alpha
Helix 26	AC8	B	31	40	Right-handed alpha
Helix 27	AC9	B	58	67	Right-handed alpha
Helix 28	AD1	B	68	76	Right-handed alpha
Helix 29	AD2	B	78	88	Right-handed alpha
Helix 30	AD3	B	92	112	Right-handed alpha
Helix 31	AD4	B	118	132	Right-handed alpha
Helix 32	AD5	B	132	137	Right-handed alpha
Helix 33	AD6	B	163	167	Right-handed 310
Helix 34	AD7	B	175	184	Right-handed alpha
Helix 35	AD8	B	225	234	Right-handed alpha
Helix 36	AD9	B	249	256	Right-handed alpha
Helix 37	AE1	B	293	306	Right-handed alpha
Helix 38	AE2	B	307	312	Right-handed 310
Helix 39	AE3	B	343	360	Right-handed alpha
Helix 40	AE4	B	373	384	Right-handed alpha
Helix 41	AE5	B	389	394	Right-handed alpha
Helix 42	AE6	B	395	399	Right-handed 310
Helix 43	AE7	B	403	411	Right-handed alpha
Helix 44	AE8	B	417	441	Right-handed alpha
Helix 45	AE9	B	471	481	Right-handed alpha
Helix 46	AF1	B	507	517	Right-handed alpha
Helix 47	AF2	B	519	524	Right-handed 310
Helix 48	AF3	B	538	550	Right-handed alpha
Helix 49	AF4	C	5	29	Right-handed alpha
Helix 50	AF5	C	31	40	Right-handed alpha
Helix 51	AF6	C	58	67	Right-handed alpha
Helix 52	AF7	C	68	76	Right-handed alpha
Helix 53	AF8	C	78	88	Right-handed alpha
Helix 54	AF9	C	92	112	Right-handed alpha
Helix 55	AG1	C	118	132	Right-handed alpha
Helix 56	AG2	C	132	137	Right-handed alpha
Helix 57	AG3	C	163	167	Right-handed 310
Helix 58	AG4	C	175	184	Right-handed alpha
Helix 59	AG5	C	225	234	Right-handed alpha
Helix 60	AG6	C	249	256	Right-handed alpha
Helix 61	AG7	C	293	307	Right-handed alpha
Helix 62	AG8	C	308	312	Right-handed 310
Helix 63	AG9	C	343	360	Right-handed alpha
Helix 64	AH1	C	373	384	Right-handed alpha
Helix 65	AH2	C	389	394	Right-handed alpha
Helix 66	AH3	C	395	399	Right-handed 310
Helix 67	AH4	C	403	411	Right-handed alpha
Helix 68	AH5	C	417	441	Right-handed alpha
Helix 69	AH6	C	471	481	Right-handed alpha
Helix 70	AH7	C	507	517	Right-handed alpha
Helix 71	AH8	C	519	524	Right-handed 310
Helix 72	AH9	C	538	551	Right-handed alpha
Helix 73	AI1	E	5	29	Right-handed alpha
Helix 74	AI2	E	31	40	Right-handed alpha
Helix 75	AI3	E	58	67	Right-handed alpha
Helix 76	AI4	E	68	76	Right-handed alpha
Helix 77	AI5	E	78	88	Right-handed alpha
Helix 78	AI6	E	92	112	Right-handed alpha
Helix 79	AI7	E	118	132	Right-handed alpha
Helix 80	AI8	E	132	137	Right-handed alpha
Helix 81	AI9	E	163	167	Right-handed 310
Helix 82	AJ1	E	175	184	Right-handed alpha
Helix 83	AJ2	E	225	234	Right-handed alpha
Helix 84	AJ3	E	249	256	Right-handed alpha
Helix 85	AJ4	E	293	307	Right-handed alpha
Helix 86	AJ5	E	308	312	Right-handed 310
Helix 87	AJ6	E	343	360	Right-handed alpha
Helix 88	AJ7	E	373	384	Right-handed alpha
Helix 89	AJ8	E	389	394	Right-handed alpha
Helix 90	AJ9	E	395	399	Right-handed 310
Helix 91	AK1	E	403	411	Right-handed alpha
Helix 92	AK2	E	417	441	Right-handed alpha
Helix 93	AK3	E	471	481	Right-handed alpha
Helix 94	AK4	E	507	517	Right-handed alpha
Helix 95	AK5	E	519	524	Right-handed 310
Helix 96	AK6	E	538	551	Right-handed alpha
Helix 97	AK7	F	5	29	Right-handed alpha
Helix 98	AK8	F	31	40	Right-handed alpha
Helix 99	AK9	F	58	67	Right-handed alpha
Helix 100	AL1	F	68	76	Right-handed alpha
Helix 101	AL2	F	78	88	Right-handed alpha
Helix 102	AL3	F	92	112	Right-handed alpha
Helix 103	AL4	F	118	132	Right-handed alpha
Helix 104	AL5	F	132	137	Right-handed alpha
Helix 105	AL6	F	163	167	Right-handed 310
Helix 106	AL7	F	175	184	Right-handed alpha
Helix 107	AL8	F	195	199	Right-handed 310
Helix 108	AL9	F	225	234	Right-handed alpha
Helix 109	AM1	F	249	256	Right-handed alpha
Helix 110	AM2	F	293	307	Right-handed alpha
Helix 111	AM3	F	308	312	Right-handed 310
Helix 112	AM4	F	343	360	Right-handed alpha
Helix 113	AM5	F	373	384	Right-handed alpha
Helix 114	AM6	F	389	394	Right-handed alpha
Helix 115	AM7	F	395	399	Right-handed 310
Helix 116	AM8	F	403	411	Right-handed alpha
Helix 117	AM9	F	417	441	Right-handed alpha
Helix 118	AN1	F	471	481	Right-handed alpha
Helix 119	AN2	F	507	517	Right-handed alpha
Helix 120	AN3	F	519	524	Right-handed 310
Helix 121	AN4	F	538	551	Right-handed alpha
Helix 122	AN5	G	5	29	Right-handed alpha
Helix 123	AN6	G	31	40	Right-handed alpha
Helix 124	AN7	G	58	67	Right-handed alpha
Helix 125	AN8	G	68	76	Right-handed alpha
Helix 126	AN9	G	78	88	Right-handed alpha
Helix 127	AO1	G	92	112	Right-handed alpha
Helix 128	AO2	G	118	132	Right-handed alpha
Helix 129	AO3	G	132	137	Right-handed alpha
Helix 130	AO4	G	163	167	Right-handed 310
Helix 131	AO5	G	175	184	Right-handed alpha
Helix 132	AO6	G	225	234	Right-handed alpha
Helix 133	AO7	G	249	256	Right-handed alpha
Helix 134	AO8	G	293	307	Right-handed alpha
Helix 135	AO9	G	308	312	Right-handed 310
Helix 136	AP1	G	343	360	Right-handed alpha
Helix 137	AP2	G	373	384	Right-handed alpha
Helix 138	AP3	G	389	394	Right-handed alpha
Helix 139	AP4	G	395	399	Right-handed 310
Helix 140	AP5	G	403	411	Right-handed alpha
Helix 141	AP6	G	417	441	Right-handed alpha
Helix 142	AP7	G	471	481	Right-handed alpha
Helix 143	AP8	G	507	517	Right-handed alpha
Helix 144	AP9	G	519	524	Right-handed 310
Helix 145	AQ1	G	538	551	Right-handed alpha
Helix 146	AQ2	H	5	29	Right-handed alpha
Helix 147	AQ3	H	31	40	Right-handed alpha
Helix 148	AQ4	H	58	67	Right-handed alpha
Helix 149	AQ5	H	68	76	Right-handed alpha
Helix 150	AQ6	H	78	88	Right-handed alpha
Helix 151	AQ7	H	92	112	Right-handed alpha
Helix 152	AQ8	H	118	132	Right-handed alpha
Helix 153	AQ9	H	132	137	Right-handed alpha
Helix 154	AR1	H	163	167	Right-handed 310
Helix 155	AR2	H	175	184	Right-handed alpha
Helix 156	AR3	H	225	234	Right-handed alpha
Helix 157	AR4	H	249	256	Right-handed alpha
Helix 158	AR5	H	293	307	Right-handed alpha
Helix 159	AR6	H	308	312	Right-handed 310
Helix 160	AR7	H	343	360	Right-handed alpha
Helix 161	AR8	H	373	384	Right-handed alpha
Helix 162	AR9	H	389	394	Right-handed alpha
Helix 163	AS1	H	395	399	Right-handed 310
Helix 164	AS2	H	403	411	Right-handed alpha
Helix 165	AS3	H	417	441	Right-handed alpha
Helix 166	AS4	H	471	480	Right-handed alpha
Helix 167	AS5	H	507	517	Right-handed alpha
Helix 168	AS6	H	519	524	Right-handed 310
Helix 169	AS7	H	538	551	Right-handed alpha
Helix 170	AS8	D	5	29	Right-handed alpha
Helix 171	AS9	D	31	38	Right-handed alpha
Helix 172	AT1	D	58	67	Right-handed alpha
Helix 173	AT2	D	68	76	Right-handed alpha
Helix 174	AT3	D	78	88	Right-handed alpha
Helix 175	AT4	D	92	112	Right-handed alpha
Helix 176	AT5	D	118	132	Right-handed alpha
Helix 177	AT6	D	132	137	Right-handed alpha
Helix 178	AT7	D	163	167	Right-handed 310
Helix 179	AT8	D	175	184	Right-handed alpha
Helix 180	AT9	D	225	234	Right-handed alpha
Helix 181	AU1	D	249	256	Right-handed alpha
Helix 182	AU2	D	293	306	Right-handed alpha
Helix 183	AU3	D	307	312	Right-handed 310
Helix 184	AU4	D	343	359	Right-handed alpha
Helix 185	AU5	D	373	384	Right-handed alpha
Helix 186	AU6	D	389	394	Right-handed alpha
Helix 187	AU7	D	395	399	Right-handed 310
Helix 188	AU8	D	403	411	Right-handed alpha
Helix 189	AU9	D	417	441	Right-handed alpha
Helix 190	AV1	D	471	481	Right-handed alpha
Helix 191	AV2	D	507	517	Right-handed alpha
Helix 192	AV3	D	519	524	Right-handed 310
Helix 193	AV4	D	538	551	Right-handed alpha

There are 16 sheets in PDB entry 8WV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	117	first strand
Strand 2	A	187	192	anti-parallel
Strand 3	A	145	149	parallel
Strand 4	A	240	244	parallel
Strand 5	A	286	291	anti-parallel
Strand 6	A	259	262	anti-parallel
Strand 7	A	484	491	anti-parallel
Strand 8	A	527	533	anti-parallel
Strand 9	A	452	455	anti-parallel
Strand 10	A	329	333	parallel
Strand 11	A	363	367	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	205	first strand
Strand 2	A	209	210	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	117	first strand
Strand 2	B	187	192	anti-parallel
Strand 3	B	145	149	parallel
Strand 4	B	240	244	parallel
Strand 5	B	286	291	anti-parallel
Strand 6	B	259	262	anti-parallel
Strand 7	B	484	491	anti-parallel
Strand 8	B	527	533	anti-parallel
Strand 9	B	452	455	anti-parallel
Strand 10	B	329	333	parallel
Strand 11	B	363	367	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	205	first strand
Strand 2	B	209	210	anti-parallel

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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	117	first strand
Strand 2	C	187	192	anti-parallel
Strand 3	C	145	149	parallel
Strand 4	C	240	244	parallel
Strand 5	C	286	291	anti-parallel
Strand 6	C	259	262	anti-parallel
Strand 7	C	484	491	anti-parallel
Strand 8	C	527	533	anti-parallel
Strand 9	C	452	455	anti-parallel
Strand 10	C	329	333	parallel
Strand 11	C	363	367	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	205	first strand
Strand 2	C	209	210	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	114	117	first strand
Strand 2	E	187	192	anti-parallel
Strand 3	E	145	149	parallel
Strand 4	E	240	244	parallel
Strand 5	E	286	291	anti-parallel
Strand 6	E	259	262	anti-parallel
Strand 7	E	484	491	anti-parallel
Strand 8	E	527	533	anti-parallel
Strand 9	E	452	456	anti-parallel
Strand 10	E	329	333	parallel
Strand 11	E	363	367	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	205	first strand
Strand 2	E	209	210	anti-parallel

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There are 11 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	114	117	first strand
Strand 2	F	187	192	anti-parallel
Strand 3	F	145	149	parallel
Strand 4	F	240	244	parallel
Strand 5	F	286	291	anti-parallel
Strand 6	F	259	262	anti-parallel
Strand 7	F	484	491	anti-parallel
Strand 8	F	527	533	anti-parallel
Strand 9	F	452	455	anti-parallel
Strand 10	F	329	333	parallel
Strand 11	F	363	367	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	204	205	first strand
Strand 2	F	209	210	anti-parallel

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There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	114	117	first strand
Strand 2	G	187	192	anti-parallel
Strand 3	G	145	149	parallel
Strand 4	G	240	244	parallel
Strand 5	G	286	291	anti-parallel
Strand 6	G	259	262	anti-parallel
Strand 7	G	484	491	anti-parallel
Strand 8	G	527	533	anti-parallel
Strand 9	G	452	455	anti-parallel
Strand 10	G	329	333	parallel
Strand 11	G	363	367	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	204	205	first strand
Strand 2	G	209	210	anti-parallel

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There are 11 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	117	first strand
Strand 2	H	187	192	anti-parallel
Strand 3	H	145	149	parallel
Strand 4	H	240	244	parallel
Strand 5	H	286	291	anti-parallel
Strand 6	H	259	262	anti-parallel
Strand 7	H	484	491	anti-parallel
Strand 8	H	527	533	anti-parallel
Strand 9	H	452	455	anti-parallel
Strand 10	H	329	333	parallel
Strand 11	H	363	367	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	204	205	first strand
Strand 2	H	209	210	anti-parallel

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There are 11 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	117	first strand
Strand 2	D	187	192	anti-parallel
Strand 3	D	145	149	parallel
Strand 4	D	240	244	parallel
Strand 5	D	286	291	anti-parallel
Strand 6	D	259	262	anti-parallel
Strand 7	D	484	491	anti-parallel
Strand 8	D	527	533	anti-parallel
Strand 9	D	452	455	anti-parallel
Strand 10	D	329	333	parallel
Strand 11	D	363	367	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	205	first strand
Strand 2	D	209	210	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WV2

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WV2