Analysis of interatomic Contacts of Structural Units in PDB entry:
8WV3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WV3 entry

There are 8 chains in PDB entry 8WV3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 5	LEU 182
B	GLY 2	ASN 184
C	LYS 3	LYS 183
D	LEU 4	LYS 183
E	GLY 2	GLU 187
F	PHE 5	ASN 184
G	GLY 2	LYS 183
H	GLU 6	LEU 182

There are 33 helices in PDB entry 8WV3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	66	69	Right-handed 310
Helix 2	AA2	A	85	99	Right-handed alpha
Helix 3	AA3	A	151	161	Right-handed alpha
Helix 4	AA4	A	166	181	Right-handed alpha
Helix 5	AA5	B	66	69	Right-handed 310
Helix 6	AA6	B	85	99	Right-handed alpha
Helix 7	AA7	B	151	161	Right-handed alpha
Helix 8	AA8	B	166	183	Right-handed alpha
Helix 9	AA9	C	66	69	Right-handed 310
Helix 10	AB1	C	85	99	Right-handed alpha
Helix 11	AB2	C	151	161	Right-handed alpha
Helix 12	AB3	C	166	182	Right-handed alpha
Helix 13	AB4	D	66	69	Right-handed 310
Helix 14	AB5	D	85	99	Right-handed alpha
Helix 15	AB6	D	151	161	Right-handed alpha
Helix 16	AB7	D	166	182	Right-handed alpha
Helix 17	AB8	E	66	69	Right-handed 310
Helix 18	AB9	E	85	99	Right-handed alpha
Helix 19	AC1	E	137	141	Right-handed 310
Helix 20	AC2	E	151	161	Right-handed alpha
Helix 21	AC3	E	166	187	Right-handed alpha
Helix 22	AC4	F	66	69	Right-handed 310
Helix 23	AC5	F	85	99	Right-handed alpha
Helix 24	AC6	F	151	161	Right-handed alpha
Helix 25	AC7	F	166	184	Right-handed alpha
Helix 26	AC8	G	66	69	Right-handed 310
Helix 27	AC9	G	85	99	Right-handed alpha
Helix 28	AD1	G	151	161	Right-handed alpha
Helix 29	AD2	G	166	182	Right-handed alpha
Helix 30	AD3	H	66	69	Right-handed 310
Helix 31	AD4	H	85	99	Right-handed alpha
Helix 32	AD5	H	151	161	Right-handed alpha
Helix 33	AD6	H	166	182	Right-handed alpha

There are 25 sheets in PDB entry 8WV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	17	first strand
Strand 2	A	22	30	anti-parallel
Strand 3	A	34	42	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	79	first strand
Strand 2	A	46	51	anti-parallel
Strand 3	A	121	132	parallel
Strand 4	A	100	112	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	74	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	146	150	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	17	first strand
Strand 2	B	22	29	anti-parallel
Strand 3	B	35	42	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	79	first strand
Strand 2	B	46	51	anti-parallel
Strand 3	B	121	132	parallel
Strand 4	B	100	112	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	74	first strand
Strand 2	B	58	65	anti-parallel
Strand 3	B	147	150	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	17	first strand
Strand 2	C	22	29	anti-parallel
Strand 3	C	35	42	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	79	first strand
Strand 2	C	46	51	anti-parallel
Strand 3	C	121	128	parallel
Strand 4	C	104	112	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	74	first strand
Strand 2	C	58	65	anti-parallel
Strand 3	C	146	150	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	17	first strand
Strand 2	D	22	29	anti-parallel
Strand 3	D	35	42	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	79	first strand
Strand 2	D	46	51	anti-parallel
Strand 3	D	121	131	parallel
Strand 4	D	101	112	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	74	first strand
Strand 2	D	58	65	anti-parallel
Strand 3	D	147	150	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	17	first strand
Strand 2	E	22	29	anti-parallel
Strand 3	E	35	42	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	79	first strand
Strand 2	E	46	51	anti-parallel
Strand 3	E	121	132	parallel
Strand 4	E	100	112	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	74	first strand
Strand 2	E	58	64	anti-parallel
Strand 3	E	147	150	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	17	first strand
Strand 2	F	22	29	anti-parallel
Strand 3	F	37	42	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	79	first strand
Strand 2	F	46	51	anti-parallel
Strand 3	F	121	128	parallel
Strand 4	F	104	112	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	74	first strand
Strand 2	F	58	65	anti-parallel
Strand 3	F	146	150	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	101	first strand
Strand 2	F	131	132	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	8	17	first strand
Strand 2	G	22	29	anti-parallel
Strand 3	G	35	42	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	79	first strand
Strand 2	G	46	51	anti-parallel
Strand 3	G	121	130	parallel
Strand 4	G	102	112	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	74	first strand
Strand 2	G	58	64	anti-parallel
Strand 3	G	147	150	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	8	17	first strand
Strand 2	H	22	29	anti-parallel
Strand 3	H	35	42	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	77	79	first strand
Strand 2	H	46	51	anti-parallel
Strand 3	H	121	128	parallel
Strand 4	H	104	112	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	74	first strand
Strand 2	H	58	65	anti-parallel
Strand 3	H	146	150	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WV3

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WV3