Analysis of interatomic Contacts of Structural Units in PDB entry:
8WV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WV8 entry

There are 2 chains in PDB entry 8WV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 18ILE 497
B
 ILE 18ILE 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8WV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 32Right-handed alpha
Helix 2
AA2
A
51 67Right-handed alpha
Helix 3
AA3
A
81 88Right-handed alpha
Helix 4
AA4
A
93 99Right-handed alpha
Helix 5
AA5
A
125 137Right-handed alpha
Helix 6
AA6
A
148 152Right-handed 310
Helix 7
AA7
A
157 173Right-handed alpha
Helix 8
AA8
A
267 274Right-handed alpha
Helix 9
AA9
A
293 308Right-handed alpha
Helix 10
AB1
A
320 331Right-handed alpha
Helix 11
AB2
A
334 341Right-handed alpha
Helix 12
AB3
A
355 371Right-handed alpha
Helix 13
AB4
A
379 384Right-handed alpha
Helix 14
AB5
A
388 406Right-handed alpha
Helix 15
AB6
B
27 32Right-handed alpha
Helix 16
AB7
B
51 68Right-handed alpha
Helix 17
AB8
B
79 87Right-handed alpha
Helix 18
AB9
B
88 90Right-handed 310
Helix 19
AC1
B
124 137Right-handed alpha
Helix 20
AC2
B
147 151Right-handed 310
Helix 21
AC3
B
156 175Right-handed alpha
Helix 22
AC4
B
267 274Right-handed alpha
Helix 23
AC5
B
293 308Right-handed alpha
Helix 24
AC6
B
320 331Right-handed alpha
Helix 25
AC7
B
334 341Right-handed alpha
Helix 26
AC8
B
355 371Right-handed alpha
Helix 27
AC9
B
388 406Right-handed alpha
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There are 11 sheets in PDB entry 8WV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
36 37anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
71 75parallel
Strand 3
A
141 145parallel
Strand 4
A
177 182parallel
Strand 5
A
41 46parallel
Strand 6
A
203 211parallel
Strand 7
A
216 225anti-parallel
Strand 8
A
234 240anti-parallel
Strand 9
A
243 246anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
278 279anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
312 316parallel
Strand 3
A
374 378parallel
Strand 4
A
409 415parallel
Strand 5
A
283 288parallel
Strand 6
A
436 444parallel
Strand 7
A
449 458anti-parallel
Strand 8
A
468 470anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 473first strand
Strand 2
A
476 477anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 106first strand
Strand 2
B
71 74parallel
Strand 3
B
141 144parallel
Strand 4
B
177 181parallel
Strand 5
B
41 45parallel
Strand 6
B
203 211parallel
Strand 7
B
216 225anti-parallel
Strand 8
B
234 236anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
243 244anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
278 279anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 346first strand
Strand 2
B
312 316parallel
Strand 3
B
374 378parallel
Strand 4
B
409 415parallel
Strand 5
B
283 288parallel
Strand 6
B
436 444parallel
Strand 7
B
449 458anti-parallel
Strand 8
B
468 470anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
472 473first strand
Strand 2
B
476 477anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 487first strand
Strand 2
B
495 496anti-parallel
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