Analysis of interatomic Contacts of Structural Units in PDB entry:
8WVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WVR entry

There are 4 chains in PDB entry 8WVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4ASP 326
B
 PRO 4ASP 326
C
 PRO 4LEU 321
D
 PRO 4THR 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 8WVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 24Right-handed alpha
Helix 2
AA2
A
32 40Right-handed alpha
Helix 3
AA3
A
60 65Right-handed alpha
Helix 4
AA4
A
67 97Right-handed alpha
Helix 5
AA5
A
100 128Right-handed alpha
Helix 6
AA6
A
131 133Right-handed 310
Helix 7
AA7
A
134 150Right-handed alpha
Helix 8
AA8
A
150 163Right-handed alpha
Helix 9
AA9
A
167 178Right-handed alpha
Helix 10
AB1
A
179 195Right-handed alpha
Helix 11
AB2
A
198 230Right-handed alpha
Helix 12
AB3
A
233 250Right-handed alpha
Helix 13
AB4
A
252 270Right-handed alpha
Helix 14
AB5
A
271 276Right-handed alpha
Helix 15
AB6
A
287 289Right-handed 310
Helix 16
AB7
A
290 313Right-handed alpha
Helix 17
AB8
A
317 323Right-handed alpha
Helix 18
AB9
B
16 24Right-handed alpha
Helix 19
AC1
B
32 40Right-handed alpha
Helix 20
AC2
B
60 65Right-handed alpha
Helix 21
AC3
B
67 97Right-handed alpha
Helix 22
AC4
B
100 128Right-handed alpha
Helix 23
AC5
B
131 133Right-handed 310
Helix 24
AC6
B
134 150Right-handed alpha
Helix 25
AC7
B
150 164Right-handed alpha
Helix 26
AC8
B
167 178Right-handed alpha
Helix 27
AC9
B
179 195Right-handed alpha
Helix 28
AD1
B
198 230Right-handed alpha
Helix 29
AD2
B
233 250Right-handed alpha
Helix 30
AD3
B
252 270Right-handed alpha
Helix 31
AD4
B
271 276Right-handed alpha
Helix 32
AD5
B
290 314Right-handed alpha
Helix 33
AD6
B
315 320Right-handed 310
Helix 34
AD7
C
16 24Right-handed alpha
Helix 35
AD8
C
32 40Right-handed alpha
Helix 36
AD9
C
60 64Right-handed 310
Helix 37
AE1
C
67 97Right-handed alpha
Helix 38
AE2
C
100 128Right-handed alpha
Helix 39
AE3
C
131 133Right-handed 310
Helix 40
AE4
C
134 150Right-handed alpha
Helix 41
AE5
C
150 164Right-handed alpha
Helix 42
AE6
C
167 178Right-handed alpha
Helix 43
AE7
C
179 195Right-handed alpha
Helix 44
AE8
C
198 230Right-handed alpha
Helix 45
AE9
C
233 250Right-handed alpha
Helix 46
AF1
C
252 269Right-handed alpha
Helix 47
AF2
C
270 272Right-handed 310
Helix 48
AF3
C
287 289Right-handed 310
Helix 49
AF4
C
290 314Right-handed alpha
Helix 50
AF5
C
315 319Right-handed 310
Helix 51
AF6
D
16 24Right-handed alpha
Helix 52
AF7
D
32 40Right-handed alpha
Helix 53
AF8
D
60 65Right-handed alpha
Helix 54
AF9
D
67 97Right-handed alpha
Helix 55
AG1
D
100 128Right-handed alpha
Helix 56
AG2
D
134 150Right-handed alpha
Helix 57
AG3
D
150 163Right-handed alpha
Helix 58
AG4
D
167 177Right-handed alpha
Helix 59
AG5
D
179 195Right-handed alpha
Helix 60
AG6
D
198 228Right-handed alpha
Helix 61
AG7
D
230 250Right-handed alpha
Helix 62
AG8
D
252 270Right-handed alpha
Helix 63
AG9
D
287 289Right-handed 310
Helix 64
AH1
D
290 313Right-handed alpha
Helix 65
AH2
D
316 323Right-handed alpha
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There are 4 sheets in PDB entry 8WVR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 281first strand
Strand 2
A
284 285anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 281first strand
Strand 2
B
284 285anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
279 281first strand
Strand 2
C
284 285anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
279 281first strand
Strand 2
D
284 285anti-parallel
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