Analysis of interatomic Contacts of Structural Units in PDB entry:
8WWA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WWA entry

There are 8 chains in PDB entry 8WWA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	T 1	T 26
I	A 1	A 4
A	SER 291	SER 896
B	SER 291	PRO 897
D	THR 11	PRO 897
E	SER 291	PRO 897
F	SER 291	PRO 897
C	THR 11	GLY 918

There are186 helices in PDB entry 8WWA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	292	296	Right-handed 310
Helix 2	AA2	A	297	309	Right-handed alpha
Helix 3	AA3	A	310	316	Right-handed 310
Helix 4	AA4	A	317	320	Right-handed 310
Helix 5	AA5	A	321	332	Right-handed alpha
Helix 6	AA6	A	335	344	Right-handed alpha
Helix 7	AA7	A	358	363	Right-handed alpha
Helix 8	AA8	A	364	366	Right-handed 310
Helix 9	AA9	A	374	385	Right-handed alpha
Helix 10	AB1	A	389	409	Right-handed alpha
Helix 11	AB2	A	416	426	Right-handed alpha
Helix 12	AB3	A	466	494	Right-handed alpha
Helix 13	AB4	A	502	516	Right-handed alpha
Helix 14	AB5	A	517	519	Right-handed 310
Helix 15	AB6	A	520	535	Right-handed alpha
Helix 16	AB7	A	591	605	Right-handed alpha
Helix 17	AB8	A	607	620	Right-handed alpha
Helix 18	AB9	A	641	654	Right-handed alpha
Helix 19	AC1	A	663	668	Right-handed alpha
Helix 20	AC2	A	680	684	Right-handed 310
Helix 21	AC3	A	703	709	Right-handed alpha
Helix 22	AC4	A	746	751	Right-handed alpha
Helix 23	AC5	A	778	783	Right-handed alpha
Helix 24	AC6	A	787	808	Right-handed alpha
Helix 25	AC7	A	818	831	Right-handed alpha
Helix 26	AC8	A	833	842	Right-handed alpha
Helix 27	AC9	A	856	869	Right-handed alpha
Helix 28	AD1	A	879	884	Right-handed alpha
Helix 29	AD2	B	291	295	Right-handed 310
Helix 30	AD3	B	297	309	Right-handed alpha
Helix 31	AD4	B	312	317	Right-handed alpha
Helix 32	AD5	B	317	330	Right-handed alpha
Helix 33	AD6	B	332	334	Right-handed 310
Helix 34	AD7	B	335	346	Right-handed alpha
Helix 35	AD8	B	355	362	Right-handed alpha
Helix 36	AD9	B	363	367	Right-handed 310
Helix 37	AE1	B	374	386	Right-handed alpha
Helix 38	AE2	B	389	409	Right-handed alpha
Helix 39	AE3	B	414	426	Right-handed alpha
Helix 40	AE4	B	466	476	Right-handed alpha
Helix 41	AE5	B	476	494	Right-handed alpha
Helix 42	AE6	B	499	516	Right-handed alpha
Helix 43	AE7	B	517	519	Right-handed 310
Helix 44	AE8	B	520	535	Right-handed alpha
Helix 45	AE9	B	591	605	Right-handed alpha
Helix 46	AF1	B	607	620	Right-handed alpha
Helix 47	AF2	B	641	654	Right-handed alpha
Helix 48	AF3	B	663	668	Right-handed alpha
Helix 49	AF4	B	680	684	Right-handed 310
Helix 50	AF5	B	701	710	Right-handed alpha
Helix 51	AF6	B	746	751	Right-handed alpha
Helix 52	AF7	B	777	781	Right-handed 310
Helix 53	AF8	B	787	808	Right-handed alpha
Helix 54	AF9	B	818	831	Right-handed alpha
Helix 55	AG1	B	833	842	Right-handed alpha
Helix 56	AG2	B	855	867	Right-handed alpha
Helix 57	AG3	B	879	886	Right-handed alpha
Helix 58	AG4	B	889	893	Right-handed 310
Helix 59	AG5	D	12	20	Right-handed alpha
Helix 60	AG6	D	21	34	Right-handed alpha
Helix 61	AG7	D	35	37	Right-handed 310
Helix 62	AG8	D	61	79	Right-handed alpha
Helix 63	AG9	D	111	128	Right-handed alpha
Helix 64	AH1	D	167	180	Right-handed alpha
Helix 65	AH2	D	181	191	Right-handed alpha
Helix 66	AH3	D	251	257	Right-handed alpha
Helix 67	AH4	D	292	296	Right-handed alpha
Helix 68	AH5	D	297	309	Right-handed alpha
Helix 69	AH6	D	317	331	Right-handed alpha
Helix 70	AH7	D	332	334	Right-handed 310
Helix 71	AH8	D	335	344	Right-handed alpha
Helix 72	AH9	D	347	353	Right-handed alpha
Helix 73	AI1	D	356	361	Right-handed alpha
Helix 74	AI2	D	361	367	Right-handed alpha
Helix 75	AI3	D	374	386	Right-handed alpha
Helix 76	AI4	D	389	408	Right-handed alpha
Helix 77	AI5	D	414	427	Right-handed alpha
Helix 78	AI6	D	466	476	Right-handed alpha
Helix 79	AI7	D	476	494	Right-handed alpha
Helix 80	AI8	D	497	516	Right-handed alpha
Helix 81	AI9	D	517	519	Right-handed 310
Helix 82	AJ1	D	520	536	Right-handed alpha
Helix 83	AJ2	D	591	605	Right-handed alpha
Helix 84	AJ3	D	607	620	Right-handed alpha
Helix 85	AJ4	D	641	654	Right-handed alpha
Helix 86	AJ5	D	662	666	Right-handed 310
Helix 87	AJ6	D	678	684	Right-handed 310
Helix 88	AJ7	D	704	710	Right-handed alpha
Helix 89	AJ8	D	746	751	Right-handed alpha
Helix 90	AJ9	D	777	783	Right-handed alpha
Helix 91	AK1	D	787	808	Right-handed alpha
Helix 92	AK2	D	818	831	Right-handed alpha
Helix 93	AK3	D	833	843	Right-handed alpha
Helix 94	AK4	D	855	870	Right-handed alpha
Helix 95	AK5	D	879	885	Right-handed alpha
Helix 96	AK6	D	886	891	Right-handed 310
Helix 97	AK7	E	297	308	Right-handed alpha
Helix 98	AK8	E	321	332	Right-handed alpha
Helix 99	AK9	E	335	346	Right-handed alpha
Helix 100	AL1	E	349	353	Right-handed 310
Helix 101	AL2	E	354	360	Right-handed alpha
Helix 102	AL3	E	374	381	Right-handed alpha
Helix 103	AL4	E	389	409	Right-handed alpha
Helix 104	AL5	E	414	426	Right-handed alpha
Helix 105	AL6	E	466	476	Right-handed alpha
Helix 106	AL7	E	476	494	Right-handed alpha
Helix 107	AL8	E	497	516	Right-handed alpha
Helix 108	AL9	E	517	519	Right-handed 310
Helix 109	AM1	E	520	536	Right-handed alpha
Helix 110	AM2	E	540	544	Right-handed 310
Helix 111	AM3	E	591	605	Right-handed alpha
Helix 112	AM4	E	607	620	Right-handed alpha
Helix 113	AM5	E	641	654	Right-handed alpha
Helix 114	AM6	E	663	668	Right-handed alpha
Helix 115	AM7	E	679	684	Right-handed 310
Helix 116	AM8	E	704	710	Right-handed alpha
Helix 117	AM9	E	777	783	Right-handed alpha
Helix 118	AN1	E	787	808	Right-handed alpha
Helix 119	AN2	E	818	831	Right-handed alpha
Helix 120	AN3	E	833	842	Right-handed alpha
Helix 121	AN4	E	857	866	Right-handed alpha
Helix 122	AN5	E	881	886	Right-handed alpha
Helix 123	AN6	E	887	893	Right-handed 310
Helix 124	AN7	F	292	296	Right-handed alpha
Helix 125	AN8	F	300	309	Right-handed alpha
Helix 126	AN9	F	318	331	Right-handed alpha
Helix 127	AO1	F	335	345	Right-handed alpha
Helix 128	AO2	F	358	363	Right-handed alpha
Helix 129	AO3	F	364	367	Right-handed 310
Helix 130	AO4	F	374	386	Right-handed alpha
Helix 131	AO5	F	388	409	Right-handed alpha
Helix 132	AO6	F	414	426	Right-handed alpha
Helix 133	AO7	F	466	476	Right-handed alpha
Helix 134	AO8	F	476	494	Right-handed alpha
Helix 135	AO9	F	498	516	Right-handed alpha
Helix 136	AP1	F	517	519	Right-handed 310
Helix 137	AP2	F	520	535	Right-handed alpha
Helix 138	AP3	F	591	605	Right-handed alpha
Helix 139	AP4	F	607	620	Right-handed alpha
Helix 140	AP5	F	641	654	Right-handed alpha
Helix 141	AP6	F	663	668	Right-handed alpha
Helix 142	AP7	F	679	684	Right-handed 310
Helix 143	AP8	F	705	710	Right-handed alpha
Helix 144	AP9	F	746	752	Right-handed alpha
Helix 145	AQ1	F	777	781	Right-handed 310
Helix 146	AQ2	F	787	808	Right-handed alpha
Helix 147	AQ3	F	818	831	Right-handed alpha
Helix 148	AQ4	F	836	842	Right-handed alpha
Helix 149	AQ5	F	855	867	Right-handed alpha
Helix 150	AQ6	F	878	882	Right-handed 310
Helix 151	AQ7	C	12	21	Right-handed alpha
Helix 152	AQ8	C	22	34	Right-handed alpha
Helix 153	AQ9	C	35	37	Right-handed 310
Helix 154	AR1	C	61	78	Right-handed alpha
Helix 155	AR2	C	111	126	Right-handed alpha
Helix 156	AR3	C	167	180	Right-handed alpha
Helix 157	AR4	C	181	190	Right-handed alpha
Helix 158	AR5	C	251	257	Right-handed alpha
Helix 159	AR6	C	297	309	Right-handed alpha
Helix 160	AR7	C	312	317	Right-handed alpha
Helix 161	AR8	C	322	330	Right-handed alpha
Helix 162	AR9	C	332	334	Right-handed 310
Helix 163	AS1	C	335	345	Right-handed alpha
Helix 164	AS2	C	360	367	Right-handed 310
Helix 165	AS3	C	374	386	Right-handed alpha
Helix 166	AS4	C	389	409	Right-handed alpha
Helix 167	AS5	C	414	426	Right-handed alpha
Helix 168	AS6	C	466	476	Right-handed alpha
Helix 169	AS7	C	476	494	Right-handed alpha
Helix 170	AS8	C	499	516	Right-handed alpha
Helix 171	AS9	C	517	519	Right-handed 310
Helix 172	AT1	C	520	535	Right-handed alpha
Helix 173	AT2	C	591	605	Right-handed alpha
Helix 174	AT3	C	607	620	Right-handed alpha
Helix 175	AT4	C	641	654	Right-handed alpha
Helix 176	AT5	C	663	668	Right-handed alpha
Helix 177	AT6	C	679	684	Right-handed 310
Helix 178	AT7	C	705	710	Right-handed alpha
Helix 179	AT8	C	746	751	Right-handed alpha
Helix 180	AT9	C	778	783	Right-handed alpha
Helix 181	AU1	C	787	808	Right-handed alpha
Helix 182	AU2	C	818	831	Right-handed alpha
Helix 183	AU3	C	833	843	Right-handed alpha
Helix 184	AU4	C	855	867	Right-handed alpha
Helix 185	AU5	C	876	887	Right-handed alpha
Helix 186	AU6	C	888	891	Right-handed 310

There are 33 sheets in PDB entry 8WWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	434	first strand
Strand 2	A	440	445	anti-parallel
Strand 3	A	460	463	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	553	first strand
Strand 2	A	556	559	anti-parallel
Strand 3	A	566	568	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	658	660	first strand
Strand 2	A	688	691	parallel
Strand 3	A	731	736	parallel
Strand 4	A	632	635	parallel
Strand 5	A	754	757	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	717	first strand
Strand 2	A	723	727	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	761	763	first strand
Strand 2	A	773	775	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	434	first strand
Strand 2	B	440	445	anti-parallel
Strand 3	B	460	463	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	553	first strand
Strand 2	B	556	559	anti-parallel
Strand 3	B	566	568	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	658	660	first strand
Strand 2	B	688	690	parallel
Strand 3	B	731	736	parallel
Strand 4	B	632	635	parallel
Strand 5	B	754	757	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	699	first strand
Strand 2	B	740	741	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	717	first strand
Strand 2	B	723	727	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	761	763	first strand
Strand 2	B	773	775	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	49	51	anti-parallel
Strand 3	D	84	86	anti-parallel
Strand 4	D	208	209	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	99	first strand
Strand 2	D	155	159	anti-parallel
Strand 3	D	142	145	anti-parallel
Strand 4	D	222	225	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	430	434	first strand
Strand 2	D	440	445	anti-parallel
Strand 3	D	460	463	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	553	first strand
Strand 2	D	556	559	anti-parallel
Strand 3	D	566	568	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	658	661	first strand
Strand 2	D	688	691	parallel
Strand 3	D	731	734	parallel
Strand 4	D	632	635	parallel
Strand 5	D	754	757	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	430	434	first strand
Strand 2	E	440	445	anti-parallel
Strand 3	E	460	463	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	550	553	first strand
Strand 2	E	556	559	anti-parallel
Strand 3	E	566	568	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	688	691	first strand
Strand 2	E	731	734	parallel
Strand 3	E	632	635	parallel
Strand 4	E	754	757	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	698	699	first strand
Strand 2	E	740	741	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	715	717	first strand
Strand 2	E	723	725	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	761	762	first strand
Strand 2	E	773	774	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	430	434	first strand
Strand 2	F	440	445	anti-parallel
Strand 3	F	460	463	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	550	553	first strand
Strand 2	F	556	559	anti-parallel
Strand 3	F	566	568	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	658	660	first strand
Strand 2	F	688	691	parallel
Strand 3	F	731	736	parallel
Strand 4	F	632	635	parallel
Strand 5	F	754	757	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	713	716	first strand
Strand 2	F	724	727	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	40	first strand
Strand 2	C	56	58	anti-parallel
Strand 3	C	49	51	anti-parallel
Strand 4	C	84	86	anti-parallel
Strand 5	C	208	209	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	98	first strand
Strand 2	C	156	159	anti-parallel
Strand 3	C	142	145	anti-parallel
Strand 4	C	222	223	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	434	first strand
Strand 2	C	440	445	anti-parallel
Strand 3	C	460	463	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	553	first strand
Strand 2	C	556	559	anti-parallel
Strand 3	C	566	568	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	658	661	first strand
Strand 2	C	688	691	parallel
Strand 3	C	731	734	parallel
Strand 4	C	631	635	parallel
Strand 5	C	754	757	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	717	first strand
Strand 2	C	723	727	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	761	762	first strand
Strand 2	C	773	774	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WWA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WWA