Analysis of interatomic Contacts of Structural Units in PDB entry:
8WWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WWQ entry

There are 2 chains in PDB entry 8WWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 17GLU 365
B
 SER 32GLU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8WWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 31Right-handed 310
Helix 2
AA2
A
32 54Right-handed alpha
Helix 3
AA3
A
75 94Right-handed alpha
Helix 4
AA4
A
114 122Right-handed alpha
Helix 5
AA5
A
163 168Right-handed 310
Helix 6
AA6
A
185 210Right-handed alpha
Helix 7
AA7
A
229 232Right-handed 310
Helix 8
AA8
A
233 252Right-handed alpha
Helix 9
AA9
A
256 263Right-handed alpha
Helix 10
AB1
A
271 283Right-handed alpha
Helix 11
AB2
A
303 324Right-handed alpha
Helix 12
AB3
A
329 342Right-handed alpha
Helix 13
AB4
A
342 349Right-handed alpha
Helix 14
AB5
B
33 54Right-handed alpha
Helix 15
AB6
B
75 94Right-handed alpha
Helix 16
AB7
B
114 122Right-handed alpha
Helix 17
AB8
B
163 168Right-handed 310
Helix 18
AB9
B
185 210Right-handed alpha
Helix 19
AC1
B
229 232Right-handed 310
Helix 20
AC2
B
233 248Right-handed alpha
Helix 21
AC3
B
257 262Right-handed alpha
Helix 22
AC4
B
271 283Right-handed alpha
Helix 23
AC5
B
303 322Right-handed alpha
Helix 24
AC6
B
329 341Right-handed alpha
Helix 25
AC7
B
342 349Right-handed alpha
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There are 2 sheets in PDB entry 8WWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 134first strand
Strand 2
A
102 109parallel
Strand 3
A
63 69parallel
Strand 4
A
147 153parallel
Strand 5
A
211 222parallel
Strand 6
A
355 362anti-parallel
Strand 7
A
285 293anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 134first strand
Strand 2
B
102 109parallel
Strand 3
B
63 69parallel
Strand 4
B
147 153parallel
Strand 5
B
211 222parallel
Strand 6
B
355 362anti-parallel
Strand 7
B
285 293anti-parallel
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