Analysis of interatomic Contacts of Structural Units in PDB entry:
8WWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WWT entry

There is 1 chain in PDB entry 8WWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 82LEU 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8WWT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 107Right-handed alpha
Helix 2
AA2
A
111 121Right-handed alpha
Helix 3
AA3
A
122 124Right-handed 310
Helix 4
AA4
A
132 134Right-handed 310
Helix 5
AA5
A
135 154Right-handed alpha
Helix 6
AA6
A
185 202Right-handed alpha
Helix 7
AA7
A
219 224Right-handed alpha
Helix 8
AA8
A
227 250Right-handed alpha
Helix 9
AA9
A
267 285Right-handed alpha
Helix 10
AB1
A
310 314Right-handed 310
Helix 11
AB2
A
320 335Right-handed alpha
Helix 12
AB3
A
405 410Right-handed 310
Helix 13
AB4
A
424 434Right-handed alpha
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There are 2 sheets in PDB entry 8WWT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
157 163parallel
Strand 3
A
128 130parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
157 163parallel
Strand 3
A
207 213parallel
Strand 4
A
254 258parallel
Strand 5
A
291 296parallel
Strand 6
A
340 344parallel
Strand 7
A
381 385parallel
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