Analysis of interatomic Contacts of Structural Units in PDB entry:
8WWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WWZ entry

There is 1 chain in PDB entry 8WWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2PRO 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8WWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
37 47Right-handed alpha
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
84 89Right-handed alpha
Helix 5
AA5
A
101 112Right-handed alpha
Helix 6
AA6
A
135 139Right-handed 310
Helix 7
AA7
A
151 169Right-handed alpha
Helix 8
AA8
A
195 199Right-handed alpha
Helix 9
AA9
A
211 220Right-handed alpha
Helix 10
AB1
A
221 224Right-handed 310
Helix 11
AB2
A
253 267Right-handed alpha
Helix 12
AB3
A
281 286Right-handed 310
Helix 13
AB4
A
297 299Right-handed 310
Helix 14
AB5
A
316 336Right-handed alpha
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There are 3 sheets in PDB entry 8WWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
70 75anti-parallel
Strand 4
A
27 33parallel
Strand 5
A
3 8parallel
Strand 6
A
92 95parallel
Strand 7
A
116 119parallel
Strand 8
A
146 148parallel
Strand 9
A
128 129parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
227 233anti-parallel
Strand 3
A
170 179parallel
Strand 4
A
240 248anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
292 295anti-parallel
Strand 7
A
273 276parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
227 233anti-parallel
Strand 3
A
170 179parallel
Strand 4
A
240 248anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
300 302anti-parallel
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