Analysis of interatomic Contacts of Structural Units in PDB entry:
8WX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8WX1 entry

There is 1 chain in PDB entry 8WX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 25ASP 566
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 8WX1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
25 61Right-handed alpha
Helix 2
AA2
A
68 97Right-handed alpha
Helix 3
AA3
A
99 123Right-handed alpha
Helix 4
AA4
A
123 131Right-handed alpha
Helix 5
AA5
A
157 187Right-handed alpha
Helix 6
AA6
A
191 224Right-handed alpha
Helix 7
AA7
A
225 247Right-handed alpha
Helix 8
AA8
A
260 273Right-handed alpha
Helix 9
AA9
A
300 341Right-handed alpha
Helix 10
AB1
A
370 399Right-handed alpha
Helix 11
AB2
A
403 435Right-handed alpha
Helix 12
AB3
A
454 456Right-handed 310
Helix 13
AB4
A
457 483Right-handed alpha
Helix 14
AB5
A
488 515Right-handed alpha
Helix 15
AB6
A
535 566Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8WX1.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
439 443first strand
Strand 2
A
446 450anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il