Analysis of interatomic Contacts of Structural Units in PDB entry:
8WY1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WY1 entry

There are 4 chains in PDB entry 8WY1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 1011	GLU 1584
B	THR 1011	ARG 1583
C	THR 1011	ARG 1583
D	THR 1011	GLU 1584

There are123 helices in PDB entry 8WY1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1013	1035	Right-handed alpha
Helix 2	AA2	A	1036	1040	Right-handed 310
Helix 3	AA3	A	1060	1078	Right-handed alpha
Helix 4	AA4	A	1081	1099	Right-handed alpha
Helix 5	AA5	A	1125	1143	Right-handed alpha
Helix 6	AA6	A	1144	1147	Right-handed 310
Helix 7	AA7	A	1153	1167	Right-handed alpha
Helix 8	AA8	A	1176	1182	Right-handed 310
Helix 9	AA9	A	1186	1204	Right-handed alpha
Helix 10	AB1	A	1207	1229	Right-handed alpha
Helix 11	AB2	A	1230	1233	Right-handed 310
Helix 12	AB3	A	1235	1241	Right-handed alpha
Helix 13	AB4	A	1241	1253	Right-handed alpha
Helix 14	AB5	A	1256	1275	Right-handed alpha
Helix 15	AB6	A	1279	1321	Right-handed alpha
Helix 16	AB7	A	1322	1327	Right-handed 310
Helix 17	AB8	A	1328	1332	Right-handed 310
Helix 18	AB9	A	1341	1343	Right-handed 310
Helix 19	AC1	A	1356	1367	Right-handed alpha
Helix 20	AC2	A	1373	1378	Right-handed alpha
Helix 21	AC3	A	1397	1403	Right-handed alpha
Helix 22	AC4	A	1404	1407	Right-handed 310
Helix 23	AC5	A	1414	1433	Right-handed alpha
Helix 24	AC6	A	1477	1483	Right-handed alpha
Helix 25	AC7	A	1488	1502	Right-handed alpha
Helix 26	AC8	A	1517	1521	Right-handed 310
Helix 27	AC9	A	1535	1550	Right-handed alpha
Helix 28	AD1	A	1552	1560	Right-handed alpha
Helix 29	AD2	A	1561	1568	Right-handed alpha
Helix 30	AD3	A	1569	1573	Right-handed 310
Helix 31	AD4	B	1013	1035	Right-handed alpha
Helix 32	AD5	B	1036	1040	Right-handed 310
Helix 33	AD6	B	1060	1078	Right-handed alpha
Helix 34	AD7	B	1081	1099	Right-handed alpha
Helix 35	AD8	B	1125	1143	Right-handed alpha
Helix 36	AD9	B	1144	1147	Right-handed 310
Helix 37	AE1	B	1153	1167	Right-handed alpha
Helix 38	AE2	B	1176	1182	Right-handed 310
Helix 39	AE3	B	1186	1204	Right-handed alpha
Helix 40	AE4	B	1207	1229	Right-handed alpha
Helix 41	AE5	B	1230	1234	Right-handed 310
Helix 42	AE6	B	1235	1241	Right-handed alpha
Helix 43	AE7	B	1241	1247	Right-handed alpha
Helix 44	AE8	B	1247	1253	Right-handed alpha
Helix 45	AE9	B	1256	1271	Right-handed alpha
Helix 46	AF1	B	1279	1321	Right-handed alpha
Helix 47	AF2	B	1322	1325	Right-handed 310
Helix 48	AF3	B	1329	1332	Right-handed 310
Helix 49	AF4	B	1356	1367	Right-handed alpha
Helix 50	AF5	B	1373	1378	Right-handed alpha
Helix 51	AF6	B	1397	1403	Right-handed alpha
Helix 52	AF7	B	1404	1407	Right-handed 310
Helix 53	AF8	B	1414	1435	Right-handed alpha
Helix 54	AF9	B	1477	1483	Right-handed alpha
Helix 55	AG1	B	1488	1502	Right-handed alpha
Helix 56	AG2	B	1517	1521	Right-handed 310
Helix 57	AG3	B	1535	1550	Right-handed alpha
Helix 58	AG4	B	1552	1560	Right-handed alpha
Helix 59	AG5	B	1561	1568	Right-handed alpha
Helix 60	AG6	B	1569	1573	Right-handed 310
Helix 61	AG7	C	1013	1035	Right-handed alpha
Helix 62	AG8	C	1036	1040	Right-handed 310
Helix 63	AG9	C	1060	1078	Right-handed alpha
Helix 64	AH1	C	1081	1099	Right-handed alpha
Helix 65	AH2	C	1125	1143	Right-handed alpha
Helix 66	AH3	C	1144	1147	Right-handed 310
Helix 67	AH4	C	1153	1166	Right-handed alpha
Helix 68	AH5	C	1177	1182	Right-handed alpha
Helix 69	AH6	C	1186	1203	Right-handed alpha
Helix 70	AH7	C	1207	1229	Right-handed alpha
Helix 71	AH8	C	1230	1234	Right-handed 310
Helix 72	AH9	C	1235	1241	Right-handed alpha
Helix 73	AI1	C	1241	1247	Right-handed alpha
Helix 74	AI2	C	1248	1253	Right-handed alpha
Helix 75	AI3	C	1256	1274	Right-handed alpha
Helix 76	AI4	C	1279	1286	Right-handed alpha
Helix 77	AI5	C	1287	1321	Right-handed alpha
Helix 78	AI6	C	1322	1327	Right-handed 310
Helix 79	AI7	C	1328	1332	Right-handed 310
Helix 80	AI8	C	1341	1343	Right-handed 310
Helix 81	AI9	C	1355	1357	Right-handed 310
Helix 82	AJ1	C	1358	1367	Right-handed alpha
Helix 83	AJ2	C	1373	1378	Right-handed alpha
Helix 84	AJ3	C	1397	1403	Right-handed alpha
Helix 85	AJ4	C	1404	1407	Right-handed 310
Helix 86	AJ5	C	1414	1435	Right-handed alpha
Helix 87	AJ6	C	1477	1483	Right-handed alpha
Helix 88	AJ7	C	1488	1502	Right-handed alpha
Helix 89	AJ8	C	1517	1521	Right-handed 310
Helix 90	AJ9	C	1535	1550	Right-handed alpha
Helix 91	AK1	C	1552	1560	Right-handed alpha
Helix 92	AK2	C	1561	1568	Right-handed alpha
Helix 93	AK3	C	1569	1573	Right-handed 310
Helix 94	AK4	D	1013	1035	Right-handed alpha
Helix 95	AK5	D	1036	1040	Right-handed 310
Helix 96	AK6	D	1060	1078	Right-handed alpha
Helix 97	AK7	D	1081	1097	Right-handed alpha
Helix 98	AK8	D	1125	1143	Right-handed alpha
Helix 99	AK9	D	1144	1147	Right-handed 310
Helix 100	AL1	D	1153	1167	Right-handed alpha
Helix 101	AL2	D	1177	1182	Right-handed alpha
Helix 102	AL3	D	1186	1204	Right-handed alpha
Helix 103	AL4	D	1207	1229	Right-handed alpha
Helix 104	AL5	D	1230	1234	Right-handed 310
Helix 105	AL6	D	1241	1247	Right-handed alpha
Helix 106	AL7	D	1256	1264	Right-handed alpha
Helix 107	AL8	D	1265	1272	Right-handed alpha
Helix 108	AL9	D	1282	1320	Right-handed alpha
Helix 109	AM1	D	1322	1327	Right-handed 310
Helix 110	AM2	D	1328	1332	Right-handed 310
Helix 111	AM3	D	1355	1357	Right-handed 310
Helix 112	AM4	D	1358	1367	Right-handed alpha
Helix 113	AM5	D	1373	1378	Right-handed alpha
Helix 114	AM6	D	1397	1403	Right-handed alpha
Helix 115	AM7	D	1404	1407	Right-handed 310
Helix 116	AM8	D	1414	1435	Right-handed alpha
Helix 117	AM9	D	1477	1483	Right-handed alpha
Helix 118	AN1	D	1488	1502	Right-handed alpha
Helix 119	AN2	D	1517	1521	Right-handed 310
Helix 120	AN3	D	1535	1550	Right-handed alpha
Helix 121	AN4	D	1552	1559	Right-handed alpha
Helix 122	AN5	D	1561	1568	Right-handed alpha
Helix 123	AN6	D	1569	1573	Right-handed 310

There are 29 sheets in PDB entry 8WY1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1054	1055	first strand
Strand 2	A	1046	1048	anti-parallel
Strand 3	A	1532	1534	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1058	1059	first strand
Strand 2	A	1110	1111	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1122	1124	first strand
Strand 2	A	1337	1339	anti-parallel
Strand 3	A	1344	1345	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1334	1335	first strand
Strand 2	A	1349	1350	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1443	1448	first strand
Strand 2	A	1454	1457	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1475	1476	first strand
Strand 2	A	1513	1515	anti-parallel
Strand 3	A	1528	1530	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1505	1506	first strand
Strand 2	A	1509	1510	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1054	1055	first strand
Strand 2	B	1046	1048	anti-parallel
Strand 3	B	1532	1534	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1058	1059	first strand
Strand 2	B	1110	1111	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1122	1124	first strand
Strand 2	B	1337	1339	anti-parallel
Strand 3	B	1344	1345	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1327	1328	first strand
Strand 2	B	1333	1334	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1389	1391	first strand
Strand 2	B	1381	1384	anti-parallel
Strand 3	C	1578	1580	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1443	1448	first strand
Strand 2	B	1454	1457	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1475	1476	first strand
Strand 2	B	1513	1515	anti-parallel
Strand 3	B	1528	1530	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1505	1506	first strand
Strand 2	B	1509	1510	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1578	1580	first strand
Strand 2	C	1381	1384	anti-parallel
Strand 3	C	1389	1392	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1054	1055	first strand
Strand 2	C	1046	1048	anti-parallel
Strand 3	C	1532	1534	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1058	1059	first strand
Strand 2	C	1110	1111	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1122	1124	first strand
Strand 2	C	1337	1339	anti-parallel
Strand 3	C	1344	1345	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1443	1448	first strand
Strand 2	C	1454	1457	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1475	1476	first strand
Strand 2	C	1513	1515	anti-parallel
Strand 3	C	1528	1530	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1505	1506	first strand
Strand 2	C	1509	1510	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1054	1055	first strand
Strand 2	D	1046	1048	anti-parallel
Strand 3	D	1532	1534	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1058	1059	first strand
Strand 2	D	1110	1111	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1122	1124	first strand
Strand 2	D	1337	1339	anti-parallel
Strand 3	D	1344	1345	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1382	1383	first strand
Strand 2	D	1390	1391	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1443	1448	first strand
Strand 2	D	1454	1457	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1475	1476	first strand
Strand 2	D	1513	1515	anti-parallel
Strand 3	D	1528	1530	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1505	1506	first strand
Strand 2	D	1509	1510	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WY1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WY1