Analysis of interatomic Contacts of Structural Units in PDB entry:
8WZI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8WZI entry

There are 3 chains in PDB entry 8WZI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 27	ASP 1136
B	ALA 27	ASP 1136
C	ALA 27	ASP 1136

There are 68 helices in PDB entry 8WZI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	337	343	Right-handed alpha
Helix 3	AA3	A	349	353	Right-handed 310
Helix 4	AA4	A	366	372	Right-handed alpha
Helix 5	AA5	A	385	390	Right-handed 310
Helix 6	AA6	A	405	411	Right-handed 310
Helix 7	AA7	A	416	422	Right-handed alpha
Helix 8	AA8	A	438	443	Right-handed alpha
Helix 9	AA9	A	635	639	Right-handed 310
Helix 10	AB1	A	734	741	Right-handed alpha
Helix 11	AB2	A	743	751	Right-handed alpha
Helix 12	AB3	A	753	780	Right-handed alpha
Helix 13	AB4	A	813	823	Right-handed alpha
Helix 14	AB5	A	846	853	Right-handed alpha
Helix 15	AB6	A	863	881	Right-handed alpha
Helix 16	AB7	A	883	888	Right-handed alpha
Helix 17	AB8	A	894	906	Right-handed alpha
Helix 18	AB9	A	910	915	Right-handed alpha
Helix 19	AC1	A	916	938	Right-handed alpha
Helix 20	AC2	A	942	962	Right-handed alpha
Helix 21	AC3	A	963	965	Right-handed 310
Helix 22	AC4	A	973	981	Right-handed alpha
Helix 23	AC5	A	982	1029	Right-handed alpha
Helix 24	AC6	B	294	304	Right-handed alpha
Helix 25	AC7	B	338	343	Right-handed alpha
Helix 26	AC8	B	349	353	Right-handed 310
Helix 27	AC9	B	365	370	Right-handed alpha
Helix 28	AD1	B	383	388	Right-handed alpha
Helix 29	AD2	B	405	410	Right-handed 310
Helix 30	AD3	B	416	422	Right-handed alpha
Helix 31	AD4	B	438	443	Right-handed alpha
Helix 32	AD5	B	635	639	Right-handed 310
Helix 33	AD6	B	734	741	Right-handed alpha
Helix 34	AD7	B	743	751	Right-handed alpha
Helix 35	AD8	B	753	780	Right-handed alpha
Helix 36	AD9	B	813	823	Right-handed alpha
Helix 37	AE1	B	846	853	Right-handed alpha
Helix 38	AE2	B	863	881	Right-handed alpha
Helix 39	AE3	B	883	888	Right-handed alpha
Helix 40	AE4	B	894	906	Right-handed alpha
Helix 41	AE5	B	910	915	Right-handed alpha
Helix 42	AE6	B	916	938	Right-handed alpha
Helix 43	AE7	B	942	962	Right-handed alpha
Helix 44	AE8	B	963	965	Right-handed 310
Helix 45	AE9	B	973	981	Right-handed alpha
Helix 46	AF1	B	982	1029	Right-handed alpha
Helix 47	AF2	C	294	304	Right-handed alpha
Helix 48	AF3	C	337	343	Right-handed alpha
Helix 49	AF4	C	364	372	Right-handed alpha
Helix 50	AF5	C	385	389	Right-handed 310
Helix 51	AF6	C	405	407	Right-handed 310
Helix 52	AF7	C	416	422	Right-handed alpha
Helix 53	AF8	C	438	443	Right-handed alpha
Helix 54	AF9	C	635	639	Right-handed 310
Helix 55	AG1	C	734	740	Right-handed alpha
Helix 56	AG2	C	743	751	Right-handed alpha
Helix 57	AG3	C	753	780	Right-handed alpha
Helix 58	AG4	C	813	823	Right-handed alpha
Helix 59	AG5	C	846	853	Right-handed alpha
Helix 60	AG6	C	863	881	Right-handed alpha
Helix 61	AG7	C	883	888	Right-handed alpha
Helix 62	AG8	C	894	906	Right-handed alpha
Helix 63	AG9	C	910	915	Right-handed alpha
Helix 64	AH1	C	916	938	Right-handed alpha
Helix 65	AH2	C	942	962	Right-handed alpha
Helix 66	AH3	C	963	965	Right-handed 310
Helix 67	AH4	C	973	981	Right-handed alpha
Helix 68	AH5	C	982	1029	Right-handed alpha

There are 36 sheets in PDB entry 8WZI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	60	66	anti-parallel
Strand 3	A	264	269	anti-parallel
Strand 4	A	90	93	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	539	543	anti-parallel
Strand 7	C	324	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	172	first strand
Strand 2	A	126	133	anti-parallel
Strand 3	A	116	121	anti-parallel
Strand 4	A	103	107	anti-parallel
Strand 5	A	237	240	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	643	644	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	539	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel
Strand 7	B	42	43	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	687	693	parallel
Strand 3	A	670	676	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	699	700	first strand
Strand 2	B	785	786	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	725	first strand
Strand 2	A	1056	1075	anti-parallel
Strand 3	A	1050	1053	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1044	1047	first strand
Strand 2	A	1056	1075	anti-parallel
Strand 3	A	1091	1094	anti-parallel
Strand 4	A	1099	1102	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	733	first strand
Strand 2	A	855	858	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1119	first strand
Strand 2	A	1084	1087	anti-parallel
Strand 3	A	1078	1079	anti-parallel
Strand 4	A	1130	1131	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	60	68	anti-parallel
Strand 3	B	262	269	anti-parallel
Strand 4	B	90	94	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	172	first strand
Strand 2	B	126	133	anti-parallel
Strand 3	B	116	121	anti-parallel
Strand 4	B	101	107	anti-parallel
Strand 5	B	237	242	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	539	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	357	358	first strand
Strand 2	B	394	403	anti-parallel
Strand 3	B	507	516	anti-parallel
Strand 4	B	430	437	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	493	494	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	687	693	parallel
Strand 3	B	670	676	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	699	701	first strand
Strand 2	C	785	787	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	725	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1050	1053	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1044	1047	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1091	1094	anti-parallel
Strand 4	B	1099	1102	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	730	733	first strand
Strand 2	B	855	858	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1119	first strand
Strand 2	B	1084	1087	anti-parallel
Strand 3	B	1078	1079	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	60	68	anti-parallel
Strand 3	C	262	269	anti-parallel
Strand 4	C	90	94	anti-parallel
Strand 5	C	188	197	anti-parallel
Strand 6	C	200	209	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	172	first strand
Strand 2	C	126	133	anti-parallel
Strand 3	C	116	121	anti-parallel
Strand 4	C	104	107	anti-parallel
Strand 5	C	237	240	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	355	356	first strand
Strand 2	C	396	403	anti-parallel
Strand 3	C	507	514	anti-parallel
Strand 4	C	431	437	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	687	693	parallel
Strand 3	C	670	676	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	708	725	first strand
Strand 2	C	1056	1075	anti-parallel
Strand 3	C	1050	1053	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1044	1047	first strand
Strand 2	C	1056	1075	anti-parallel
Strand 3	C	1091	1094	anti-parallel
Strand 4	C	1099	1102	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	733	first strand
Strand 2	C	855	858	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1117	1119	first strand
Strand 2	C	1084	1087	anti-parallel
Strand 3	C	1078	1079	anti-parallel
Strand 4	C	1130	1131	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8WZI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8WZI