Analysis of interatomic Contacts of Structural Units in PDB entry:
8X0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8X0H entry

There are 2 chains in PDB entry 8X0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 25	ALA 827
B	ARG 25	ALA 827

There are 54 helices in PDB entry 8X0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	81	Right-handed alpha
Helix 2	AA2	A	101	115	Right-handed alpha
Helix 3	AA3	A	152	165	Right-handed alpha
Helix 4	AA4	A	177	181	Right-handed 310
Helix 5	AA5	A	194	197	Right-handed 310
Helix 6	AA6	A	198	209	Right-handed alpha
Helix 7	AA7	A	221	239	Right-handed alpha
Helix 8	AA8	A	253	267	Right-handed alpha
Helix 9	AA9	A	279	294	Right-handed alpha
Helix 10	AB1	A	310	314	Right-handed 310
Helix 11	AB2	A	335	343	Right-handed alpha
Helix 12	AB3	A	354	363	Right-handed alpha
Helix 13	AB4	A	397	419	Right-handed alpha
Helix 14	AB5	A	426	430	Right-handed 310
Helix 15	AB6	A	433	444	Right-handed alpha
Helix 16	AB7	A	560	563	Right-handed 310
Helix 17	AB8	A	577	603	Right-handed alpha
Helix 18	AB9	A	607	612	Right-handed alpha
Helix 19	AC1	A	614	636	Right-handed alpha
Helix 20	AC2	A	640	679	Right-handed alpha
Helix 21	AC3	A	691	715	Right-handed alpha
Helix 22	AC4	A	736	742	Right-handed alpha
Helix 23	AC5	A	743	762	Right-handed alpha
Helix 24	AC6	A	770	793	Right-handed alpha
Helix 25	AC7	A	797	818	Right-handed alpha
Helix 26	AC8	A	818	827	Right-handed alpha
Helix 27	AC9	B	48	52	Right-handed 310
Helix 28	AD1	B	64	81	Right-handed alpha
Helix 29	AD2	B	104	113	Right-handed alpha
Helix 30	AD3	B	151	166	Right-handed alpha
Helix 31	AD4	B	177	181	Right-handed 310
Helix 32	AD5	B	194	209	Right-handed alpha
Helix 33	AD6	B	221	236	Right-handed alpha
Helix 34	AD7	B	253	265	Right-handed alpha
Helix 35	AD8	B	266	268	Right-handed 310
Helix 36	AD9	B	279	294	Right-handed alpha
Helix 37	AE1	B	334	344	Right-handed alpha
Helix 38	AE2	B	352	363	Right-handed alpha
Helix 39	AE3	B	397	419	Right-handed alpha
Helix 40	AE4	B	426	430	Right-handed 310
Helix 41	AE5	B	433	443	Right-handed alpha
Helix 42	AE6	B	559	563	Right-handed 310
Helix 43	AE7	B	578	581	Right-handed 310
Helix 44	AE8	B	582	604	Right-handed alpha
Helix 45	AE9	B	609	613	Right-handed 310
Helix 46	AF1	B	615	635	Right-handed alpha
Helix 47	AF2	B	640	679	Right-handed alpha
Helix 48	AF3	B	691	715	Right-handed alpha
Helix 49	AF4	B	736	762	Right-handed alpha
Helix 50	AF5	B	766	769	Right-handed 310
Helix 51	AF6	B	770	787	Right-handed alpha
Helix 52	AF7	B	787	793	Right-handed alpha
Helix 53	AF8	B	799	818	Right-handed alpha
Helix 54	AF9	B	818	825	Right-handed alpha

There are 20 sheets in PDB entry 8X0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	92	97	anti-parallel
Strand 3	A	36	41	parallel
Strand 4	A	143	147	parallel
Strand 5	A	169	171	parallel
Strand 6	A	189	190	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	213	214	first strand
Strand 2	A	241	242	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	219	first strand
Strand 2	A	246	248	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	274	first strand
Strand 2	A	300	301	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	469	471	anti-parallel
Strand 3	A	481	483	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	486	first strand
Strand 2	A	493	494	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	533	535	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	543	first strand
Strand 2	A	549	551	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	558	first strand
Strand 2	A	565	567	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	722	first strand
Strand 2	A	730	733	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	39	first strand
Strand 2	B	91	95	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	169	171	parallel
Strand 3	B	188	190	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	214	first strand
Strand 2	B	241	242	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	275	first strand
Strand 2	B	300	302	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	329	first strand
Strand 2	B	466	471	anti-parallel
Strand 3	B	481	482	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	447	first strand
Strand 2	B	453	455	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	488	first strand
Strand 2	B	491	494	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	521	first strand
Strand 2	B	535	536	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	545	first strand
Strand 2	B	548	551	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	722	first strand
Strand 2	B	730	733	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8X0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8X0H