Analysis of interatomic Contacts of Structural Units in PDB entry:
8X1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X1G entry

There is 1 chain in PDB entry 8X1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1LYS 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 8X1G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
20 32Right-handed alpha
Helix 3
AA3
A
39 45Right-handed alpha
Helix 4
AA4
A
46 64Right-handed alpha
Helix 5
AA5
A
70 85Right-handed alpha
Helix 6
AA6
A
124 134Right-handed alpha
Helix 7
AA7
A
135 137Right-handed 310
Helix 8
AA8
A
145 167Right-handed alpha
Helix 9
AA9
A
178 194Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8X1G.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 38first strand
Strand 2
A
89 93parallel
Strand 3
A
9 15parallel
Strand 4
A
114 118parallel
Strand 5
A
170 173parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il