Analysis of interatomic Contacts of Structural Units in PDB entry:
8X1W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X1W entry

There is 1 chain in PDB entry 8X1W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 29PRO 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8X1W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 42Right-handed alpha
Helix 2
AA2
A
45 56Right-handed alpha
Helix 3
AA3
A
73 84Right-handed alpha
Helix 4
AA4
A
94 102Right-handed alpha
Helix 5
AA5
A
110 126Right-handed alpha
Helix 6
AA6
A
126 131Right-handed alpha
Helix 7
AA7
A
133 149Right-handed alpha
Helix 8
AA8
A
157 175Right-handed alpha
Helix 9
AA9
A
178 196Right-handed alpha
Helix 10
AB1
A
206 235Right-handed alpha
Helix 11
AB2
A
243 251Right-handed alpha
Helix 12
AB3
A
260 293Right-handed alpha
Helix 13
AB4
A
293 310Right-handed alpha
Helix 14
AB5
A
318 324Right-handed alpha
Helix 15
AB6
A
325 339Right-handed alpha
Helix 16
AB7
A
371 373Right-handed 310
Helix 17
AB8
A
387 390Right-handed 310
Helix 18
AB9
A
391 396Right-handed alpha
Helix 19
AC1
A
408 412Right-handed 310
Helix 20
AC2
A
415 433Right-handed alpha
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There are 3 sheets in PDB entry 8X1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
365 369parallel
Strand 4
A
344 349anti-parallel
Strand 5
A
89 91anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 156first strand
Strand 2
A
460 465anti-parallel
Strand 3
A
434 439anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
358 360anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il