Analysis of interatomic Contacts of Structural Units in PDB entry:
8X2Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8X2Z entry

There are 11 chains in PDB entry 8X2Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 38	ARG 134
B	ARG 23	GLY 101
C	GLN 16	ILE 112
D	ARG 36	THR 128
E	PRO 38	ARG 134
F	LYS 16	GLY 101
G	GLN 16	VAL 120
H	ALA 35	THR 128
K	ALA 162	LEU 441
L	LEU 19	THR 101
M	TRP 130	GLU 290

There are 60 helices in PDB entry 8X2Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	57	Right-handed alpha
Helix 2	AA2	A	63	76	Right-handed alpha
Helix 3	AA3	A	85	114	Right-handed alpha
Helix 4	AA4	A	120	131	Right-handed alpha
Helix 5	AA5	B	25	29	Right-handed 310
Helix 6	AA6	B	30	42	Right-handed alpha
Helix 7	AA7	B	49	76	Right-handed alpha
Helix 8	AA8	B	82	93	Right-handed alpha
Helix 9	AA9	C	27	37	Right-handed alpha
Helix 10	AB1	C	46	48	Right-handed 310
Helix 11	AB2	C	49	62	Right-handed alpha
Helix 12	AB3	C	63	68	Right-handed 310
Helix 13	AB4	C	69	74	Right-handed alpha
Helix 14	AB5	C	80	87	Right-handed 310
Helix 15	AB6	C	91	96	Right-handed alpha
Helix 16	AB7	D	40	51	Right-handed alpha
Helix 17	AB8	D	60	87	Right-handed alpha
Helix 18	AB9	D	93	104	Right-handed alpha
Helix 19	AC1	D	106	127	Right-handed alpha
Helix 20	AC2	E	44	57	Right-handed alpha
Helix 21	AC3	E	63	74	Right-handed alpha
Helix 22	AC4	E	85	114	Right-handed alpha
Helix 23	AC5	E	120	132	Right-handed alpha
Helix 24	AC6	F	33	41	Right-handed alpha
Helix 25	AC7	F	50	76	Right-handed alpha
Helix 26	AC8	F	82	94	Right-handed alpha
Helix 27	AC9	G	27	39	Right-handed alpha
Helix 28	AD1	G	49	72	Right-handed alpha
Helix 29	AD2	G	73	75	Right-handed 310
Helix 30	AD3	G	81	89	Right-handed alpha
Helix 31	AD4	H	40	52	Right-handed alpha
Helix 32	AD5	H	58	87	Right-handed alpha
Helix 33	AD6	H	93	105	Right-handed alpha
Helix 34	AD7	H	106	126	Right-handed alpha
Helix 35	AD8	K	186	190	Right-handed 310
Helix 36	AD9	K	213	217	Right-handed 310
Helix 37	AE1	K	246	254	Right-handed alpha
Helix 38	AE2	K	347	359	Right-handed alpha
Helix 39	AE3	K	370	377	Right-handed alpha
Helix 40	AE4	K	383	391	Right-handed alpha
Helix 41	AE5	K	412	416	Right-handed 310
Helix 42	AE6	L	23	28	Right-handed alpha
Helix 43	AE7	L	29	30	Right-handed 310
Helix 44	AE8	L	31	39	Right-handed 310
Helix 45	AE9	M	153	158	Right-handed alpha
Helix 46	AF1	M	194	196	Right-handed 310
Helix 47	AF2	M	197	204	Right-handed alpha
Helix 48	AF3	M	221	226	Right-handed alpha
Helix 49	AF4	M	267	272	Right-handed alpha
Helix 50	AF5	M	275	283	Right-handed alpha
Helix 51	AF6	M	284	286	Right-handed 310
Helix 52	AF7	M	354	359	Right-handed alpha
Helix 53	AF8	N	7	11	Right-handed 310
Helix 54	AF9	N	19	24	Right-handed alpha
Helix 55	AG1	N	24	32	Right-handed alpha
Helix 56	AG2	N	33	35	Right-handed 310
Helix 57	AG3	N	82	84	Right-handed 310
Helix 58	AG4	N	85	91	Right-handed alpha
Helix 59	AG5	N	94	107	Right-handed alpha
Helix 60	AG6	N	108	111	Right-handed 310

There are 7 sheets in PDB entry 8X2Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	D	56	57	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	103	first strand
Strand 2	F	96	98	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	44	first strand
Strand 2	H	91	92	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	78	79	first strand
Strand 2	H	56	57	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	170	172	first strand
Strand 2	K	175	177	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	234	239	first strand
Strand 2	K	273	278	anti-parallel
Strand 3	K	285	286	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	288	289	first strand
Strand 2	K	306	307	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8X2Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
8X2Z