Analysis of interatomic Contacts of Structural Units in PDB entry:
8X30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X30 entry

There are 17 chains in PDB entry 8X30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 GLU 160TRP 431
M
 GLU 143SER 358
N
 VAL 6GLU 112
O
 GLU 160LEU 441
P
 GLU 14SER 45
Q
 THR 129PHE 369
R
 MET 1LEU 117
I
 A 1 T 146
J
 A 147 T 292
A
 PRO 38ARG 134
B
 HIS 18GLY 101
C
 GLN 16ASN 113
D
 ARG 36THR 128
E
 PRO 38ARG 134
F
 ILE 21GLY 101
G
 LEU 13VAL 120
H
 ALA 35ALA 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 8X30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
187 192Right-handed alpha
Helix 2
AA2
K
244 259Right-handed alpha
Helix 3
AA3
K
315 330Right-handed alpha
Helix 4
AA4
K
344 362Right-handed alpha
Helix 5
AA5
K
369 374Right-handed alpha
Helix 6
AA6
K
383 391Right-handed alpha
Helix 7
AA7
K
412 416Right-handed 310
Helix 8
AA8
M
153 157Right-handed 310
Helix 9
AA9
M
165 177Right-handed alpha
Helix 10
AB1
M
188 193Right-handed alpha
Helix 11
AB2
M
199 204Right-handed alpha
Helix 12
AB3
M
216 220Right-handed 310
Helix 13
AB4
M
231 239Right-handed alpha
Helix 14
AB5
M
264 269Right-handed alpha
Helix 15
AB6
M
271 287Right-handed alpha
Helix 16
AB7
M
337 356Right-handed alpha
Helix 17
AB8
N
11 16Right-handed alpha
Helix 18
AB9
N
16 40Right-handed alpha
Helix 19
AC1
N
79 112Right-handed alpha
Helix 20
AC2
O
186 192Right-handed alpha
Helix 21
AC3
O
210 218Right-handed alpha
Helix 22
AC4
O
245 258Right-handed alpha
Helix 23
AC5
O
308 312Right-handed 310
Helix 24
AC6
O
316 329Right-handed alpha
Helix 25
AC7
O
345 361Right-handed alpha
Helix 26
AC8
O
370 375Right-handed alpha
Helix 27
AC9
O
382 389Right-handed alpha
Helix 28
AD1
P
15 25Right-handed alpha
Helix 29
AD2
P
25 34Right-handed alpha
Helix 30
AD3
P
34 40Right-handed alpha
Helix 31
AD4
Q
132 137Right-handed alpha
Helix 32
AD5
Q
153 157Right-handed 310
Helix 33
AD6
Q
165 175Right-handed alpha
Helix 34
AD7
Q
185 203Right-handed alpha
Helix 35
AD8
Q
221 226Right-handed alpha
Helix 36
AD9
Q
232 242Right-handed alpha
Helix 37
AE1
Q
263 286Right-handed alpha
Helix 38
AE2
Q
331 367Right-handed alpha
Helix 39
AE3
R
2 15Right-handed alpha
Helix 40
AE4
R
15 24Right-handed alpha
Helix 41
AE5
R
25 51Right-handed alpha
Helix 42
AE6
R
71 113Right-handed alpha
Helix 43
AE7
A
46 56Right-handed alpha
Helix 44
AE8
A
63 77Right-handed alpha
Helix 45
AE9
A
85 113Right-handed alpha
Helix 46
AF1
A
120 131Right-handed alpha
Helix 47
AF2
B
30 42Right-handed alpha
Helix 48
AF3
B
49 76Right-handed alpha
Helix 49
AF4
B
83 94Right-handed alpha
Helix 50
AF5
C
17 23Right-handed alpha
Helix 51
AF6
C
28 39Right-handed alpha
Helix 52
AF7
C
51 65Right-handed alpha
Helix 53
AF8
C
66 69Right-handed 310
Helix 54
AF9
C
70 75Right-handed alpha
Helix 55
AG1
C
80 87Right-handed alpha
Helix 56
AG2
C
91 96Right-handed alpha
Helix 57
AG3
D
40 50Right-handed alpha
Helix 58
AG4
D
60 87Right-handed alpha
Helix 59
AG5
D
93 104Right-handed alpha
Helix 60
AG6
D
106 125Right-handed alpha
Helix 61
AG7
E
44 57Right-handed alpha
Helix 62
AG8
E
63 76Right-handed alpha
Helix 63
AG9
E
85 114Right-handed alpha
Helix 64
AH1
E
120 131Right-handed alpha
Helix 65
AH2
F
33 38Right-handed alpha
Helix 66
AH3
F
50 77Right-handed alpha
Helix 67
AH4
F
82 93Right-handed alpha
Helix 68
AH5
G
27 39Right-handed alpha
Helix 69
AH6
G
49 75Right-handed alpha
Helix 70
AH7
G
80 89Right-handed alpha
Helix 71
AH8
G
91 96Right-handed alpha
Helix 72
AH9
G
97 99Right-handed 310
Helix 73
AI1
H
40 52Right-handed alpha
Helix 74
AI2
H
58 87Right-handed alpha
Helix 75
AI3
H
93 105Right-handed alpha
Helix 76
AI4
H
106 126Right-handed alpha
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There are 4 sheets in PDB entry 8X30. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
170 172first strand
Strand 2
K
175 177anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
226 230first strand
Strand 2
K
235 238anti-parallel
Strand 3
K
274 277anti-parallel
Strand 4
K
288 290anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
170 172first strand
Strand 2
O
175 177anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
229 230first strand
Strand 2
O
235 239anti-parallel
Strand 3
O
273 279anti-parallel
Strand 4
O
284 291anti-parallel
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