Analysis of interatomic Contacts of Structural Units in PDB entry:
8X6M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X6M entry

There are 2 chains in PDB entry 8X6M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 367
B
 MET 1GLU 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 8X6M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 19Right-handed 310
Helix 2
AA2
A
20 26Right-handed alpha
Helix 3
AA3
A
27 29Right-handed 310
Helix 4
AA4
A
37 55Right-handed alpha
Helix 5
AA5
A
69 84Right-handed alpha
Helix 6
AA6
A
93 108Right-handed alpha
Helix 7
AA7
A
121 125Right-handed 310
Helix 8
AA8
A
154 160Right-handed alpha
Helix 9
AA9
A
161 186Right-handed alpha
Helix 10
AB1
A
196 223Right-handed alpha
Helix 11
AB2
A
227 249Right-handed alpha
Helix 12
AB3
A
251 262Right-handed alpha
Helix 13
AB4
A
263 267Right-handed 310
Helix 14
AB5
A
270 286Right-handed alpha
Helix 15
AB6
A
289 304Right-handed alpha
Helix 16
AB7
A
309 313Right-handed 310
Helix 17
AB8
A
317 330Right-handed alpha
Helix 18
AB9
A
334 339Right-handed 310
Helix 19
AC1
A
344 366Right-handed alpha
Helix 20
AC2
B
16 19Right-handed 310
Helix 21
AC3
B
20 26Right-handed alpha
Helix 22
AC4
B
27 29Right-handed 310
Helix 23
AC5
B
37 56Right-handed alpha
Helix 24
AC6
B
69 84Right-handed alpha
Helix 25
AC7
B
93 107Right-handed alpha
Helix 26
AC8
B
154 160Right-handed alpha
Helix 27
AC9
B
161 186Right-handed alpha
Helix 28
AD1
B
196 224Right-handed alpha
Helix 29
AD2
B
227 249Right-handed alpha
Helix 30
AD3
B
251 261Right-handed alpha
Helix 31
AD4
B
262 267Right-handed 310
Helix 32
AD5
B
270 286Right-handed alpha
Helix 33
AD6
B
289 304Right-handed alpha
Helix 34
AD7
B
309 313Right-handed 310
Helix 35
AD8
B
317 330Right-handed alpha
Helix 36
AD9
B
334 339Right-handed 310
Helix 37
AE1
B
344 367Right-handed alpha
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There are 4 sheets in PDB entry 8X6M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
B
10 14anti-parallel
Strand 3
B
149 153parallel
Strand 4
B
111 115parallel
Strand 5
B
87 92parallel
Strand 6
B
31 36parallel
Strand 7
B
58 63parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
31 36parallel
Strand 3
A
87 92parallel
Strand 4
A
111 115parallel
Strand 5
A
149 153parallel
Strand 6
A
10 14parallel
Strand 7
B
3 6anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
137 142anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 131first strand
Strand 2
B
137 142anti-parallel
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