Analysis of interatomic Contacts of Structural Units in PDB entry:
8X74


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X74 entry

There is 1 chain in PDB entry 8X74 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ILE 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8X74. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed alpha
Helix 2
AA2
A
23 27Right-handed 310
Helix 3
AA3
A
29 33Right-handed 310
Helix 4
AA4
A
55 57Right-handed 310
Helix 5
AA5
A
59 73Right-handed alpha
Helix 6
AA6
A
84 100Right-handed alpha
Helix 7
AA7
A
102 107Right-handed alpha
Helix 8
AA8
A
108 110Right-handed 310
Helix 9
AA9
A
147 151Right-handed 310
Helix 10
AB1
A
152 156Right-handed 310
Helix 11
AB2
A
162 189Right-handed alpha
Helix 12
AB3
A
194 201Right-handed alpha
Helix 13
AB4
A
241 243Right-handed 310
Helix 14
AB5
A
269 276Right-handed alpha
Helix 15
AB6
A
313 317Right-handed 310
Helix 16
AB7
A
330 339Right-handed alpha
Helix 17
AB8
A
346 352Right-handed 310
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There are 3 sheets in PDB entry 8X74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
75 79parallel
Strand 3
A
264 268anti-parallel
Strand 4
A
234 239anti-parallel
Strand 5
A
295 303anti-parallel
Strand 6
A
205 213anti-parallel
Strand 7
A
139 146anti-parallel
Strand 8
A
122 124anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 228first strand
Strand 2
A
285 287anti-parallel
Strand 3
A
246 250anti-parallel
Strand 4
A
253 256anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 310first strand
Strand 2
A
328 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il