Analysis of interatomic Contacts of Structural Units in PDB entry:
8X7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8X7H entry

There are 8 chains in PDB entry 8X7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 123	VAL 289
B	ASN 61	PRO 165
C	GLY 123	VAL 289
D	ASN 61	PRO 165
E	GLY 123	VAL 289
F	ASN 61	THR 166
G	GLY 123	VAL 289
H	ASN 61	THR 166

There are 40 helices in PDB entry 8X7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	194	203	Right-handed alpha
Helix 2	AA2	A	204	207	Right-handed 310
Helix 3	AA3	A	208	213	Right-handed alpha
Helix 4	AA4	B	62	69	Right-handed alpha
Helix 5	AA5	B	69	76	Right-handed alpha
Helix 6	AA6	B	80	85	Right-handed alpha
Helix 7	AA7	B	96	101	Right-handed alpha
Helix 8	AA8	B	106	116	Right-handed alpha
Helix 9	AA9	B	122	140	Right-handed alpha
Helix 10	AB1	B	144	162	Right-handed alpha
Helix 11	AB2	C	194	203	Right-handed alpha
Helix 12	AB3	C	204	207	Right-handed 310
Helix 13	AB4	C	208	213	Right-handed alpha
Helix 14	AB5	D	62	69	Right-handed alpha
Helix 15	AB6	D	69	76	Right-handed alpha
Helix 16	AB7	D	80	85	Right-handed alpha
Helix 17	AB8	D	96	101	Right-handed alpha
Helix 18	AB9	D	106	116	Right-handed alpha
Helix 19	AC1	D	122	140	Right-handed alpha
Helix 20	AC2	D	144	162	Right-handed alpha
Helix 21	AC3	E	194	204	Right-handed alpha
Helix 22	AC4	E	205	207	Right-handed 310
Helix 23	AC5	E	208	213	Right-handed alpha
Helix 24	AC6	F	62	69	Right-handed alpha
Helix 25	AC7	F	69	76	Right-handed alpha
Helix 26	AC8	F	80	85	Right-handed alpha
Helix 27	AC9	F	96	101	Right-handed alpha
Helix 28	AD1	F	106	116	Right-handed alpha
Helix 29	AD2	F	122	140	Right-handed alpha
Helix 30	AD3	F	144	162	Right-handed alpha
Helix 31	AD4	G	194	204	Right-handed alpha
Helix 32	AD5	G	205	207	Right-handed 310
Helix 33	AD6	G	208	213	Right-handed alpha
Helix 34	AD7	H	62	69	Right-handed alpha
Helix 35	AD8	H	69	76	Right-handed alpha
Helix 36	AD9	H	80	85	Right-handed alpha
Helix 37	AE1	H	96	101	Right-handed alpha
Helix 38	AE2	H	106	113	Right-handed alpha
Helix 39	AE3	H	122	140	Right-handed alpha
Helix 40	AE4	H	144	162	Right-handed alpha

There are 4 sheets in PDB entry 8X7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	133	first strand
Strand 2	A	139	149	anti-parallel
Strand 3	A	154	165	anti-parallel
Strand 4	A	168	179	anti-parallel
Strand 5	A	230	240	anti-parallel
Strand 6	A	257	263	anti-parallel
Strand 7	A	268	274	anti-parallel
Strand 8	A	282	288	anti-parallel
Strand 9	A	126	133	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	133	first strand
Strand 2	C	138	149	anti-parallel
Strand 3	C	154	161	anti-parallel
Strand 4	C	171	179	anti-parallel
Strand 5	C	230	240	anti-parallel
Strand 6	C	257	263	anti-parallel
Strand 7	C	268	274	anti-parallel
Strand 8	C	282	288	anti-parallel
Strand 9	C	126	133	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	230	231	first strand
Strand 2	E	257	263	anti-parallel
Strand 3	E	268	274	anti-parallel
Strand 4	E	283	288	anti-parallel
Strand 5	E	127	133	anti-parallel
Strand 6	E	138	149	anti-parallel
Strand 7	E	154	162	anti-parallel
Strand 8	E	171	179	anti-parallel
Strand 9	E	233	240	anti-parallel
Strand 10	E	257	263	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	230	231	first strand
Strand 2	G	257	263	anti-parallel
Strand 3	G	268	274	anti-parallel
Strand 4	G	283	288	anti-parallel
Strand 5	G	127	133	anti-parallel
Strand 6	G	138	149	anti-parallel
Strand 7	G	154	162	anti-parallel
Strand 8	G	170	179	anti-parallel
Strand 9	G	233	240	anti-parallel
Strand 10	G	257	263	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8X7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8X7H