Analysis of interatomic Contacts of Structural Units in PDB entry:
8X89


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X89 entry

There are 4 chains in PDB entry 8X89 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 243
B
 MET 1MET 243
C
 MET 1MET 243
D
 MET 1MET 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8X89. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
41 48Right-handed alpha
Helix 3
AA3
A
64 80Right-handed alpha
Helix 4
AA4
A
101 131Right-handed alpha
Helix 5
AA5
A
146 172Right-handed alpha
Helix 6
AA6
A
188 194Right-handed alpha
Helix 7
AA7
A
195 204Right-handed alpha
Helix 8
AA8
A
213 226Right-handed alpha
Helix 9
AA9
B
15 28Right-handed alpha
Helix 10
AB1
B
41 47Right-handed alpha
Helix 11
AB2
B
64 80Right-handed alpha
Helix 12
AB3
B
101 131Right-handed alpha
Helix 13
AB4
B
146 172Right-handed alpha
Helix 14
AB5
B
190 194Right-handed 310
Helix 15
AB6
B
195 204Right-handed alpha
Helix 16
AB7
B
213 227Right-handed alpha
Helix 17
AB8
C
15 28Right-handed alpha
Helix 18
AB9
C
41 47Right-handed alpha
Helix 19
AC1
C
64 79Right-handed alpha
Helix 20
AC2
C
103 131Right-handed alpha
Helix 21
AC3
C
150 172Right-handed alpha
Helix 22
AC4
C
188 193Right-handed alpha
Helix 23
AC5
C
197 204Right-handed alpha
Helix 24
AC6
C
213 227Right-handed alpha
Helix 25
AC7
D
15 28Right-handed alpha
Helix 26
AC8
D
41 47Right-handed alpha
Helix 27
AC9
D
48 52Right-handed 310
Helix 28
AD1
D
64 80Right-handed alpha
Helix 29
AD2
D
101 131Right-handed alpha
Helix 30
AD3
D
146 172Right-handed alpha
Helix 31
AD4
D
195 204Right-handed alpha
Helix 32
AD5
D
213 227Right-handed alpha
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There are 4 sheets in PDB entry 8X89. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
84 87parallel
Strand 5
A
133 138parallel
Strand 6
A
176 183parallel
Strand 7
A
234 237parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 59first strand
Strand 2
B
31 36parallel
Strand 3
B
7 10parallel
Strand 4
B
84 87parallel
Strand 5
B
133 138parallel
Strand 6
B
176 183parallel
Strand 7
B
234 237parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 57first strand
Strand 2
C
31 34parallel
Strand 3
C
7 10parallel
Strand 4
C
84 87parallel
Strand 5
C
133 138parallel
Strand 6
C
176 183parallel
Strand 7
C
234 237parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 59first strand
Strand 2
D
31 36parallel
Strand 3
D
7 10parallel
Strand 4
D
84 87parallel
Strand 5
D
133 138parallel
Strand 6
D
176 183parallel
Strand 7
D
234 237parallel
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