Analysis of interatomic Contacts of Structural Units in PDB entry:
8X9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8X9V entry

There are 4 chains in PDB entry 8X9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
F
 GLY 9GLY 432
O
 VAL 13GLU 175
C
 GLY 9ILE 435
D
 ASP 12LEU 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 8X9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
F
32 39Right-handed alpha
Helix 2
AA2
F
42 51Right-handed alpha
Helix 3
AA3
F
54 65Right-handed alpha
Helix 4
AA4
F
76 82Right-handed alpha
Helix 5
AA5
F
105 114Right-handed alpha
Helix 6
AA6
F
114 130Right-handed alpha
Helix 7
AA7
F
140 143Right-handed 310
Helix 8
AA8
F
144 160Right-handed alpha
Helix 9
AA9
F
166 170Right-handed 310
Helix 10
AB1
F
185 188Right-handed 310
Helix 11
AB2
F
189 198Right-handed alpha
Helix 12
AB3
F
215 219Right-handed 310
Helix 13
AB4
F
226 231Right-handed alpha
Helix 14
AB5
F
231 239Right-handed alpha
Helix 15
AB6
F
239 246Right-handed alpha
Helix 16
AB7
F
276 284Right-handed alpha
Helix 17
AB8
F
308 312Right-handed alpha
Helix 18
AB9
F
317 324Right-handed alpha
Helix 19
AC1
F
341 357Right-handed alpha
Helix 20
AC2
F
369 380Right-handed alpha
Helix 21
AC3
F
384 396Right-handed alpha
Helix 22
AC4
F
401 407Right-handed 310
Helix 23
AC5
F
410 421Right-handed alpha
Helix 24
AC6
F
421 431Right-handed alpha
Helix 25
AC7
O
14 19Right-handed alpha
Helix 26
AC8
O
20 32Right-handed alpha
Helix 27
AC9
O
38 41Right-handed 310
Helix 28
AD1
O
42 54Right-handed alpha
Helix 29
AD2
O
59 71Right-handed alpha
Helix 30
AD3
O
73 84Right-handed alpha
Helix 31
AD4
O
102 107Right-handed alpha
Helix 32
AD5
O
109 122Right-handed alpha
Helix 33
AD6
O
145 149Right-handed 310
Helix 34
AD7
O
163 175Right-handed alpha
Helix 35
AD8
C
32 39Right-handed alpha
Helix 36
AD9
C
42 51Right-handed alpha
Helix 37
AE1
C
54 66Right-handed alpha
Helix 38
AE2
C
76 83Right-handed alpha
Helix 39
AE3
C
105 114Right-handed alpha
Helix 40
AE4
C
114 130Right-handed alpha
Helix 41
AE5
C
140 143Right-handed 310
Helix 42
AE6
C
144 160Right-handed alpha
Helix 43
AE7
C
166 170Right-handed 310
Helix 44
AE8
C
185 188Right-handed 310
Helix 45
AE9
C
189 198Right-handed alpha
Helix 46
AF1
C
215 219Right-handed 310
Helix 47
AF2
C
226 239Right-handed alpha
Helix 48
AF3
C
239 245Right-handed alpha
Helix 49
AF4
C
276 284Right-handed alpha
Helix 50
AF5
C
309 312Right-handed 310
Helix 51
AF6
C
317 324Right-handed alpha
Helix 52
AF7
C
341 356Right-handed alpha
Helix 53
AF8
C
369 380Right-handed alpha
Helix 54
AF9
C
384 397Right-handed alpha
Helix 55
AG1
C
401 406Right-handed 310
Helix 56
AG2
C
410 421Right-handed alpha
Helix 57
AG3
C
421 431Right-handed alpha
Helix 58
AG4
D
14 19Right-handed alpha
Helix 59
AG5
D
20 32Right-handed alpha
Helix 60
AG6
D
38 41Right-handed 310
Helix 61
AG7
D
42 54Right-handed alpha
Helix 62
AG8
D
59 71Right-handed alpha
Helix 63
AG9
D
73 84Right-handed alpha
Helix 64
AH1
D
102 108Right-handed alpha
Helix 65
AH2
D
109 122Right-handed alpha
Helix 66
AH3
D
145 149Right-handed 310
Helix 67
AH4
D
163 173Right-handed alpha
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There are 6 sheets in PDB entry 8X9V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
175 180first strand
Strand 2
F
133 138parallel
Strand 3
F
92 97parallel
Strand 4
F
221 225parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
267 272first strand
Strand 2
F
254 261anti-parallel
Strand 3
F
332 337parallel
Strand 4
F
293 297anti-parallel
Strand 5
F
306 307anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
134 138first strand
Strand 2
O
95 99parallel
Strand 3
O
152 154anti-parallel
Strand 4
O
157 159anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 180first strand
Strand 2
C
133 138parallel
Strand 3
C
92 97parallel
Strand 4
C
221 225parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
267 272first strand
Strand 2
C
254 261anti-parallel
Strand 3
C
332 337parallel
Strand 4
C
293 298anti-parallel
Strand 5
C
306 307anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 138first strand
Strand 2
D
95 99parallel
Strand 3
D
152 154anti-parallel
Strand 4
D
157 159anti-parallel
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