Analysis of interatomic Contacts of Structural Units in PDB entry:
8XA1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8XA1 entry

There are 8 chains in PDB entry 8XA1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 26	LEU 1394
C	ILE 25	LEU 1394
G	ALA 3	VAL 315
I	ALA 3	VAL 315
P	ALA 3	VAL 315
R	ALA 3	VAL 315
Y	THR 107	TYR 467
d	ALA 8	TYR 467

There are138 helices in PDB entry 8XA1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	149	156	Right-handed alpha
Helix 2	AA2	A	163	202	Right-handed alpha
Helix 3	AA3	A	206	217	Right-handed alpha
Helix 4	AA4	A	223	241	Right-handed alpha
Helix 5	AA5	A	252	264	Right-handed alpha
Helix 6	AA6	A	292	303	Right-handed alpha
Helix 7	AA7	A	326	338	Right-handed alpha
Helix 8	AA8	A	342	349	Right-handed alpha
Helix 9	AA9	A	352	357	Right-handed alpha
Helix 10	AB1	A	474	479	Right-handed alpha
Helix 11	AB2	A	480	485	Right-handed 310
Helix 12	AB3	A	486	494	Right-handed alpha
Helix 13	AB4	A	517	528	Right-handed alpha
Helix 14	AB5	A	543	549	Right-handed alpha
Helix 15	AB6	A	552	556	Right-handed 310
Helix 16	AB7	A	594	598	Right-handed 310
Helix 17	AB8	A	604	616	Right-handed alpha
Helix 18	AB9	A	623	634	Right-handed alpha
Helix 19	AC1	A	641	651	Right-handed alpha
Helix 20	AC2	A	653	659	Right-handed alpha
Helix 21	AC3	A	660	673	Right-handed alpha
Helix 22	AC4	A	683	694	Right-handed alpha
Helix 23	AC5	A	700	724	Right-handed alpha
Helix 24	AC6	A	735	741	Right-handed alpha
Helix 25	AC7	A	756	766	Right-handed alpha
Helix 26	AC8	A	822	835	Right-handed alpha
Helix 27	AC9	A	835	842	Right-handed alpha
Helix 28	AD1	A	851	860	Right-handed alpha
Helix 29	AD2	A	885	889	Right-handed 310
Helix 30	AD3	A	893	902	Right-handed alpha
Helix 31	AD4	A	906	912	Right-handed alpha
Helix 32	AD5	A	912	917	Right-handed alpha
Helix 33	AD6	A	987	992	Right-handed 310
Helix 34	AD7	A	997	1004	Right-handed alpha
Helix 35	AD8	A	1010	1014	Right-handed 310
Helix 36	AD9	A	1022	1032	Right-handed alpha
Helix 37	AE1	A	1035	1047	Right-handed alpha
Helix 38	AE2	A	1051	1062	Right-handed alpha
Helix 39	AE3	A	1147	1151	Right-handed 310
Helix 40	AE4	A	1159	1172	Right-handed alpha
Helix 41	AE5	A	1214	1218	Right-handed 310
Helix 42	AE6	A	1242	1247	Right-handed alpha
Helix 43	AE7	A	1270	1277	Right-handed alpha
Helix 44	AE8	A	1278	1281	Right-handed 310
Helix 45	AE9	A	1290	1294	Right-handed 310
Helix 46	AF1	A	1306	1315	Right-handed alpha
Helix 47	AF2	C	85	89	Right-handed 310
Helix 48	AF3	C	98	102	Right-handed 310
Helix 49	AF4	C	148	156	Right-handed alpha
Helix 50	AF5	C	166	202	Right-handed alpha
Helix 51	AF6	C	206	217	Right-handed alpha
Helix 52	AF7	C	223	241	Right-handed alpha
Helix 53	AF8	C	243	248	Right-handed alpha
Helix 54	AF9	C	252	264	Right-handed alpha
Helix 55	AG1	C	292	301	Right-handed alpha
Helix 56	AG2	C	324	333	Right-handed alpha
Helix 57	AG3	C	472	477	Right-handed 310
Helix 58	AG4	C	480	485	Right-handed 310
Helix 59	AG5	C	486	494	Right-handed alpha
Helix 60	AG6	C	516	528	Right-handed alpha
Helix 61	AG7	C	543	549	Right-handed alpha
Helix 62	AG8	C	552	558	Right-handed 310
Helix 63	AG9	C	594	598	Right-handed 310
Helix 64	AH1	C	604	616	Right-handed alpha
Helix 65	AH2	C	623	635	Right-handed alpha
Helix 66	AH3	C	640	651	Right-handed alpha
Helix 67	AH4	C	653	658	Right-handed alpha
Helix 68	AH5	C	660	676	Right-handed alpha
Helix 69	AH6	C	686	693	Right-handed alpha
Helix 70	AH7	C	700	724	Right-handed alpha
Helix 71	AH8	C	756	764	Right-handed alpha
Helix 72	AH9	C	822	842	Right-handed alpha
Helix 73	AI1	C	851	860	Right-handed alpha
Helix 74	AI2	C	885	889	Right-handed 310
Helix 75	AI3	C	893	901	Right-handed alpha
Helix 76	AI4	C	906	912	Right-handed alpha
Helix 77	AI5	C	912	917	Right-handed alpha
Helix 78	AI6	C	939	943	Right-handed 310
Helix 79	AI7	C	987	992	Right-handed 310
Helix 80	AI8	C	996	1006	Right-handed alpha
Helix 81	AI9	C	1010	1014	Right-handed 310
Helix 82	AJ1	C	1022	1031	Right-handed alpha
Helix 83	AJ2	C	1036	1046	Right-handed alpha
Helix 84	AJ3	C	1051	1061	Right-handed alpha
Helix 85	AJ4	C	1147	1151	Right-handed 310
Helix 86	AJ5	C	1159	1172	Right-handed alpha
Helix 87	AJ6	C	1214	1220	Right-handed 310
Helix 88	AJ7	C	1239	1244	Right-handed alpha
Helix 89	AJ8	C	1270	1277	Right-handed alpha
Helix 90	AJ9	C	1278	1281	Right-handed 310
Helix 91	AK1	C	1292	1297	Right-handed alpha
Helix 92	AK2	C	1306	1315	Right-handed alpha
Helix 93	AK3	G	20	26	Right-handed alpha
Helix 94	AK4	G	47	52	Right-handed 310
Helix 95	AK5	G	60	70	Right-handed alpha
Helix 96	AK6	G	153	159	Right-handed alpha
Helix 97	AK7	G	190	194	Right-handed 310
Helix 98	AK8	G	198	208	Right-handed alpha
Helix 99	AK9	G	234	243	Right-handed alpha
Helix 100	AL1	G	246	256	Right-handed alpha
Helix 101	AL2	G	266	273	Right-handed alpha
Helix 102	AL3	G	281	286	Right-handed alpha
Helix 103	AL4	I	21	26	Right-handed alpha
Helix 104	AL5	I	47	52	Right-handed 310
Helix 105	AL6	I	60	68	Right-handed alpha
Helix 106	AL7	I	153	162	Right-handed alpha
Helix 107	AL8	I	200	208	Right-handed alpha
Helix 108	AL9	I	234	243	Right-handed alpha
Helix 109	AM1	I	247	256	Right-handed alpha
Helix 110	AM2	I	268	273	Right-handed alpha
Helix 111	AM3	I	281	287	Right-handed alpha
Helix 112	AM4	P	17	27	Right-handed alpha
Helix 113	AM5	P	59	69	Right-handed alpha
Helix 114	AM6	P	151	160	Right-handed alpha
Helix 115	AM7	P	198	207	Right-handed alpha
Helix 116	AM8	P	212	216	Right-handed 310
Helix 117	AM9	P	222	231	Right-handed alpha
Helix 118	AN1	P	282	288	Right-handed alpha
Helix 119	AN2	R	17	27	Right-handed alpha
Helix 120	AN3	R	59	69	Right-handed alpha
Helix 121	AN4	R	154	159	Right-handed alpha
Helix 122	AN5	R	198	206	Right-handed alpha
Helix 123	AN6	R	222	229	Right-handed alpha
Helix 124	AN7	R	271	276	Right-handed alpha
Helix 125	AN8	R	282	288	Right-handed alpha
Helix 126	AN9	Y	154	168	Right-handed alpha
Helix 127	AO1	Y	188	194	Right-handed alpha
Helix 128	AO2	Y	201	207	Right-handed alpha
Helix 129	AO3	Y	209	216	Right-handed alpha
Helix 130	AO4	Y	224	237	Right-handed alpha
Helix 131	AO5	Y	339	345	Right-handed alpha
Helix 132	AO6	d	154	161	Right-handed alpha
Helix 133	AO7	d	161	166	Right-handed alpha
Helix 134	AO8	d	188	194	Right-handed alpha
Helix 135	AO9	d	201	207	Right-handed alpha
Helix 136	AP1	d	209	216	Right-handed alpha
Helix 137	AP2	d	224	237	Right-handed alpha
Helix 138	AP3	d	339	345	Right-handed alpha

There are 49 sheets in PDB entry 8XA1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	107	first strand
Strand 2	C	41	43	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	143	first strand
Strand 2	A	1107	1118	anti-parallel
Strand 3	A	1092	1093	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	1107	1118	anti-parallel
Strand 3	A	1098	1103	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	313	first strand
Strand 2	A	378	387	anti-parallel
Strand 3	A	390	396	anti-parallel
Strand 4	A	287	291	parallel
Strand 5	A	1068	1084	anti-parallel
Strand 6	A	1128	1134	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	422	first strand
Strand 2	A	1068	1084	anti-parallel
Strand 3	A	1203	1209	anti-parallel
Strand 4	A	1144	1145	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	568	first strand
Strand 2	A	586	591	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	752	753	first strand
Strand 2	A	947	953	parallel
Strand 3	A	925	931	anti-parallel
Strand 4	A	772	775	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	956	958	first strand
Strand 2	A	846	850	anti-parallel
Strand 3	A	974	976	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1317	1319	first strand
Strand 2	A	1339	1341	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1355	1356	first strand
Strand 2	A	1381	1382	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	95	first strand
Strand 2	C	1090	1094	parallel
Strand 3	C	1108	1120	anti-parallel
Strand 4	C	138	143	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	95	first strand
Strand 2	C	1090	1094	parallel
Strand 3	C	1108	1120	anti-parallel
Strand 4	C	1098	1103	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	112	first strand
Strand 2	C	129	135	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	279	first strand
Strand 2	C	306	313	anti-parallel
Strand 3	C	378	387	anti-parallel
Strand 4	C	390	394	anti-parallel
Strand 5	C	287	290	parallel
Strand 6	C	1083	1086	anti-parallel
Strand 7	C	1127	1129	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	422	first strand
Strand 2	C	1068	1079	anti-parallel
Strand 3	C	1134	1137	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	422	first strand
Strand 2	C	1068	1079	anti-parallel
Strand 3	C	1203	1209	anti-parallel
Strand 4	C	1144	1145	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	466	470	first strand
Strand 2	C	456	460	anti-parallel
Strand 3	C	1355	1356	anti-parallel
Strand 4	C	1381	1382	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	563	569	first strand
Strand 2	C	585	591	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	752	753	first strand
Strand 2	C	947	953	parallel
Strand 3	C	925	931	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	846	847	first strand
Strand 2	C	957	958	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1318	1319	first strand
Strand 2	C	1339	1340	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	31	34	first strand
Strand 2	G	71	74	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	99	100	first strand
Strand 2	G	309	310	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	112	115	first strand
Strand 2	G	139	142	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	128	first strand
Strand 2	G	133	134	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	177	179	first strand
Strand 2	G	182	184	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	31	34	first strand
Strand 2	I	71	74	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	99	100	first strand
Strand 2	I	309	310	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	127	128	first strand
Strand 2	I	133	134	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	177	179	first strand
Strand 2	I	182	184	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	40	41	first strand
Strand 2	P	8	10	parallel
Strand 3	P	83	85	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	30	34	first strand
Strand 2	P	71	75	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	99	100	first strand
Strand 2	P	309	310	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	139	142	first strand
Strand 2	P	112	116	anti-parallel
Strand 3	P	293	295	anti-parallel
Strand 4	P	312	314	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	40	41	first strand
Strand 2	R	8	10	parallel
Strand 3	R	83	85	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	31	34	first strand
Strand 2	R	71	74	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	99	100	first strand
Strand 2	R	309	310	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	139	142	first strand
Strand 2	R	112	116	anti-parallel
Strand 3	R	293	294	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	111	116	first strand
Strand 2	Y	260	265	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	184	186	first strand
Strand 2	Y	131	133	anti-parallel
Strand 3	Y	246	249	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	269	270	first strand
Strand 2	Y	456	457	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	288	289	first strand
Strand 2	Y	451	452	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	327	332	first strand
Strand 2	Y	308	314	anti-parallel
Strand 3	Y	421	428	anti-parallel
Strand 4	Y	463	464	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	439	440	first strand
Strand 2	Y	447	448	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	111	116	first strand
Strand 2	d	260	265	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	183	186	first strand
Strand 2	d	131	134	anti-parallel
Strand 3	d	246	249	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	269	270	first strand
Strand 2	d	456	457	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	288	289	first strand
Strand 2	d	451	452	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	327	332	first strand
Strand 2	d	308	314	anti-parallel
Strand 3	d	420	428	anti-parallel
Strand 4	d	463	466	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8XA1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8XA1